Job Description Q46908 Confidence 99.89% Date Thu Jan 5 12:35:46 GMT 2012 Rank 5 Aligned Residues 173 % Identity 11% Template c1o94D_ PDB info PDB header:electron transport Chain: D: PDB Molecule:electron transfer flavoprotein alpha-subunit; PDBTitle: ternary complex between trimethylamine dehydrogenase and2 electron transferring flavoprotein Resolution 2.0 Å

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		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	P	D	I	S	L	L	R	S	L	L	G	A	D	E	Q	A	A	A	A	L	L	L	A	Q	R	K	N	G	T	P	M	S	L	T	A	L	S	M	G	D	E	R	A	L	H	W	L	R	Y	L	M	A	L	G	F	E	E	A	V	L	L	E	T	A	A	D	L	R	F	A	P	E	F	V	A	R	H	I
Query Conservation
Alig confidence																																	.	.										.																										.
Template Conservation																																	.	.										.																										.
Template Sequence		L	V	I	A	E	H	R	R	N	D	L	R	P	V	S	L	E	L	I	G	A	A	N	G	L	K	K	S	G	E	D	.	.	K	V	V	V	A	V	I	G	S	.	Q	A	D	A	F	V	P	A	L	S	V	N	G	V	D	E	L	V	V	V	K	G	S	S	I	.	D	F	D	P	D	V	F	E	A	S	V
Template Known Secondary structure									T	T				T											T	T		S	S	T	T		.	.								S	T	.	T	G	G	G	G						B	T	T		S								S		S	.	S
Template Predicted Secondary structure																																	.	.										.																										.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.			.	.	.	.	.	40	.	.	.		.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.		.	70	.	.	.	.	.	.	.	.	.
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.					.	.	180	.	.	.	.
Predicted Secondary structure																																																																							.	.	.	.
Query SS confidence																																																																							.	.	.	.
Query Sequence		A	E	W	Q	H	Q	N	P	L	D	L	I	I	T	G	C	Q	S	S	E	G	Q	N	G	Q	T	P	F	L	L	A	E	M	L	G	W	P	C	F	T	Q	V	E	R	F	T	L	D	A	L	F	I	T	L	E	Q	R	T	E	H	G	L	R	C	C	R	V	R	L	.	.	.	.	P	A	V	I	A	V	R
Query Conservation																																																																							.	.	.	.
Alig confidence																								.	.	.																																													.	.	.	.							.
Template Conservation																								.	.	.																																																							.
Template Sequence		S	A	L	I	A	A	H	N	P	S	V	V	L	L	P	H	S	V	D	S	L	G	.	.	.	Y	A	S	S	L	A	S	K	T	G	Y	G	F	A	T	D	V	Y	I	V	E	Y	Q	G	D	E	L	V	A	T	R	G	G	Y	N	Q	K	V	N	V	E	V	D	F	P	G	K	S	T	V	V	L	T	I	.
Template Known Secondary structure											S							S					T	.	.	.	T							T	T	T														T	T									T	T	T	T								T	T		S							.
Template Predicted Secondary structure																								.	.	.																																																							.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.				.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	C	G	E	V	A	L	P	V	P	G	M	R	Q	R	M	A	A	G	K	A	E	I	I	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	P	S	V	F	K	P	L	E	G	A	G	S	P	V	V	S	N	V	D	A	P	S	V	Q
Template Known Secondary structure			T	T	S	S					S	B
Template Predicted Secondary structure
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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