 |
Job Description | Q46908 | Confidence | 21.78% | Date | Thu Jan 5 12:35:46 GMT 2012 |
Rank | 143 | Aligned Residues | 45 |
% Identity | 16% | Template | c1afwB_ |
PDB info |
PDB header:thiolase | Chain: B: PDB Molecule:3-ketoacetyl-coa thiolase; |
PDBTitle: the 1.8 angstrom crystal structure of the dimeric2 peroxisomal thiolase of saccharomyces cerevisiae
|
Resolution | 1.80 Å |
|
  |   |
101 | . | . | . | . | . | . | . | . | |
|
|
|
|
110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | E | F | V | A | R | H | I | A | . |
. |
. |
. |
. |
E | W | Q | H | Q | N | P | L | D | L | I | I | T | G | C | Q | S | S | E | G | Q | N | G | Q | T | P | F | L | L | A | E | M | L | G | W | P |
Query Conservation |   |
  |   |   |
|
|   |   |
|
| . | . | . | . | . |   |   |   |
|   |   |   |   |
|
|
|
|   |
|   |   |
|   |
|   |   |   |
|   |
|   |   |   |
|
|   |   |
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |
|
|   |   |
|   |   |
|
|
|
|   |   |   |   |
|
|   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|
|   |
Template Sequence |   |
Y | N | F | L | N | E | F | I | G | R | F | P | E | P | L | R | A | D | L | N | L | I | E | E | V | A | C | G | N | V | L | N | V | G | A | G | A | T | E | H | R | A | A | C | L | A | S | G | I | P |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  | T | S |
|  |  |  |  |  |
| G | G | G |
|
|
|  |  |  |  |
| S | S | S | G | G | G | G |  |  |  |  |  |  |  |  |  |  | T | T |
|
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
64 | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|