Return to main results Retrieve Phyre Job Id

Job DescriptionP0AG96
Confidence45.47%DateThu Jan 5 11:28:31 GMT 2012
Rank9Aligned Residues53
% Identity17%Templated1rh5b_
SCOP infoSingle transmembrane helix Preprotein translocase SecE subunit Preprotein translocase SecE subunit
Resolution3.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   70.........80.........90.........100.........110.........120..
Predicted Secondary structure 



Query SS confidence 




















































Query Sequence  AFAREARTEVRKVIWPTRQETLHTTLIVAAVTAVMSLILWGLDGILVRLVSFI
Query Conservation   
  

  




 



 
    
 


  


  
 
   
     
   
Alig confidence 




















































Template Conservation   

 
  



 




 


  





 

 


 




  

  
 
 
Template Sequence  EFIEECRRVWLVLKKPTKDEYLAVAKVTALGISLLGIIGYIIHVPATYIKGIL
Template Known Secondary structure  S




Template Predicted Secondary structure 



Template SS confidence 




















































   13......20.........30.........40.........50.........60.....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions