Return to main results Retrieve Phyre Job Id

Job DescriptionP0AG96
Confidence38.88%DateThu Jan 5 11:28:31 GMT 2012
Rank10Aligned Residues46
% Identity17%Templatec3mp7B_
PDB info PDB header:protein transportChain: B: PDB Molecule:preprotein translocase subunit sece; PDBTitle: lateral opening of a translocon upon entry of protein suggests the2 mechanism of insertion into membranes
Resolution2.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   70......... 80.........90.........100.........110.....
Predicted Secondary structure  ...



Query SS confidence 









. . .



































Query Sequence  AFAREARTEV. . . RKVIWPTRQETLHTTLIVAAVTAVMSLILWGLDGIL
Query Conservation   
  

  

...


 



 
    
 


  


  
 
   
   
Alig confidence 









...



































Template Conservation   
  











 


 
 












 

  

 




Template Sequence  HFWKESRRAFLVTKKPNWATYKRAAKITGLGIILIGLIGMLIRIVGILI
Template Known Secondary structure  TTS



TT
Template Predicted Secondary structure 



Template SS confidence 
















































   910.........20.........30.........40.........50.......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions