Job Description P77338 Confidence 99.11% Date Thu Jan 5 12:28:00 GMT 2012 Rank 4 Aligned Residues 83 % Identity 18% Template d2vv5a3 SCOP info Mechanosensitive channel protein MscS (YggB), transmembrane region Mechanosensitive channel protein MscS (YggB), transmembrane region Mechanosensitive channel protein MscS (YggB), transmembrane region Resolution 3.45

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		845	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	L	F	A	I	I	A	S	M	V	A	W	A	L	I	R	N	L	P	G	L	L	E	V	L	V	L	S	R	L	N	M	R	Q	G	A	S	Y	A	I	T	T	I	L	N	Y	I	I	I	A	V	G	A	M	T	V	F	G	S	L	G	V	S	W	D	K	L	Q	W	L	A	A	A	L	S	V	G	L	G
Query Conservation
Alig confidence																												.
Template Conservation																												.
Template Sequence		N	I	V	A	A	L	A	I	I	I	V	G	L	I	I	A	R	M	I	S	N	A	V	N	R	L	.	M	I	S	R	K	I	D	A	T	V	A	D	F	L	S	A	L	V	R	Y	G	I	I	A	F	T	L	I	A	A	L	G	R	V	G	V	Q	T	A	S	V	I	A	V	L	G	A	A	G	L	V	V	G
Template Known Secondary structure																												.						S																											T	T	T			S	T	T
Template Predicted Secondary structure																												.
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.		.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
		925	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	G	L	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	A	L	Q
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		109	110	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions