Job Description P77338 Confidence 66.60% Date Thu Jan 5 12:28:00 GMT 2012 Rank 75 Aligned Residues 175 % Identity 14% Template d2ap3a1 SCOP info Four-helical up-and-down bundle MW0975(SA0943)-like MW0975(SA0943)-like Resolution 1.60

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		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.			.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure																																														.	.
Query SS confidence																																														.	.
Query Sequence		Q	Q	D	L	T	D	T	L	A	T	L	D	K	I	D	R	I	K	E	E	T	V	Q	L	R	Q	K	V	A	E	A	P	E	K	M	R	Q	A	T	A	A	L	T	A	.	.	L	S	D	V	D	N	D	E	E	T	R	K	I	L	S	T	L	S	L	R	Q	L	E	T	R	V	A	Q	A	L	D	D	L	Q
Query Conservation																																														.	.
Alig confidence																																														.	.
Template Conservation
Template Sequence		K	K	E	I	K	A	Y	L	K	Q	V	D	K	I	K	D	D	E	E	P	I	K	T	V	G	K	K	I	A	E	L	D	E	K	K	K	K	L	T	E	D	V	N	S	K	D	T	A	V	R	G	K	A	V	K	D	L	I	K	N	A	D	D	R	L	K	E	F	E	K	E	E	D	A	I	K	K	S	E	Q
Template Known Secondary structure																		T	T																			T	T	T	T	G	G	G		S	S
Template Predicted Secondary structure
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	A	Q	N	D	L	A	S	Y	N	S	Q	L	V	S	L	Q	T	Q	P	E	R	V	Q	N	A	M	Y	N	A	S	Q	Q	L	Q	Q	I	R	S	R	L	D	G	T	D	V	G	E	T	A	L	R	P	S	Q	K	V	L	M	Q	A	Q	Q	A	L	L	N	A	E	I	D	Q	Q	R	K	S	L	E	G	N
Query Conservation
Alig confidence																																																								.	.	.	.
Template Conservation																																																								.	.	.	.
Template Sequence		D	F	K	K	A	D	N	I	D	N	D	V	K	R	K	E	V	K	Q	L	D	D	V	L	K	E	K	Y	K	L	H	S	D	Y	A	K	A	Y	K	K	A	V	N	S	E	K	T	L	F	K	Y	L	N	Q	.	.	.	.	N	D	A	T	Q	Q	G	V	N	E	K	S	K	A	I	E	Q	N	Y	K	K	L
Template Known Secondary structure				T	T		.																																															T	S	.	.	.	.	T	T
Template Predicted Secondary structure																																																								.	.	.	.
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.					.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	V	L	Q	D	T	L	Q	K	Q	R	D	Y	V	T	A	N	S	A	R	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	E	V	S	D	K	Y	T	K	V	L	N	K	V	Q	K	E	K	Q	D	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions