Return to main results Retrieve Phyre Job Id

Job DescriptionP77338
Confidence60.34%DateThu Jan 5 12:28:00 GMT 2012
Rank81Aligned Residues20
% Identity40%Templatec4a1cS_
PDB info PDB header:ribosomeChain: S: PDB Molecule:rpl26; PDBTitle: t.thermophila 60s ribosomal subunit in complex with2 initiation factor 6. this file contains 5s rrna,3 5.8s rrna and proteins of molecule 4.
Resolution3.52 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   945....950.... .....960....
Predicted Secondary structure 





.....

Query SS confidence 









. . . . .









Query Sequence  PVRIGDTVTI. . . . . GSFSGTVSKI
Query Conservation      

 
  .....    
 
  
Alig confidence 









.....









Template Conservation   




 
 

 
  


 


  
Template Sequence  PVRKDDEVLIVRGKFKGNKGKVTQV
Template Known Secondary structure 

TT

SSTTTT
Template Predicted Secondary structure 







Template SS confidence 
























   48.50.........60.........70..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions