Job Description P77338 Confidence 37.23% Date Thu Jan 5 12:28:00 GMT 2012 Rank 151 Aligned Residues 88 % Identity 13% Template c3k0tA_ PDB info PDB header:sugar binding protein Chain: A: PDB Molecule:endoribonuclease l-psp, putative; PDBTitle: crystal structure of pspto -psp protein in complex with d-beta-glucose2 from pseudomonas syringae pv. tomato str. dc3000 Resolution 2.10 Å

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		942	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	E	R	P	V	R	I	G	D	T	V	T	I	G	S	F	S	G	T	V	S	K	I	R	I	R	A	T	T	I	T	D	F	D	R	K	E	V	I	I	P	N	K	A	F	V	T	E	R	L	I	N	W	S	L	T	D	T	T	T	R	L	V	I	R	L	G	V	A	Y	G	S	D	L	E	K	V	R	K	V
Query Conservation
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	S	Q	A	I	K	A	G	N	T	V	Y	X	S	G	Q	I	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	D	P	S	T	X	E	L	V	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	I	E	A	Q	I	T	Q	V	F	E	N
Template Known Secondary structure				S					T	T									S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	B		T	T	T		S	B		S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.																					.	.	.	.	40	.	.	.	.	.																					.	.	.	.	50	.	.	.	.	.	.	.
		1022	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	K	A	A	T	E	H	P	R	V	M	H	E	P	M	P	E	V	F	F	T	A	F	G	A	S	T	L	D	H	E	L	R	L	Y	V	R	E	L	R	D	R	S	R	T	V	D	E	L	N	R	T	I	D	Q	L	C	R	E	N	D	I	N	I	A	F	N	Q	L	E	V
Query Conservation
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.															.	.	.	.	.
Template Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.															.	.	.	.	.
Template Sequence		L	K	S	V	A	Q	A	A	G	G	S	F	K	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	V	K	L	N	I	F	L	T	D	L	G	H	F	.	.	.	.	A	K	V	N	E	I	X	G	S	Y	F	S	Q	P	.	.	.	.	.	Y	P	A	R	A	A
Template Known Secondary structure									T	T			G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									S		G	G	G		.	.	.	.								T	T	T			S	S	.	.	.	.	.
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.															.	.	.	.	.
Template SS confidence
		58	.	60	.	.	.	.	.	.	.	.	.	70	.																.	.	.	.	.	.	.	.	80	.	.	.	.	.					.	.	.	.	90	.	.	.	.	.	.	.	.	.						100	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions