Return to main results Retrieve Phyre Job Id

Job DescriptionP77338
Confidence97.27%DateThu Jan 5 12:28:00 GMT 2012
Rank16Aligned Residues113
% Identity9%Templatec3ghgK_
PDB info PDB header:blood clottingChain: K: PDB Molecule:fibrinogen beta chain; PDBTitle: crystal structure of human fibrinogen
Resolution2.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   72.......80.........90.........100.........110.........120.........130.........140.........150.
Predicted Secondary structure 
Query SS confidence 















































































Query Sequence  TDTLATLDKIDRIKEETVQLRQKVAEAPEKMRQATAALTALSDVDNDEETRKILSTLSLRQLETRVAQALDDLQNAQNDL
Query Conservation 

    



  
  

  
   
  
  

 

  

  
                 
 


  
      
  

  
Alig confidence 









































































..



Template Conservation 

 
 
 

  


 

 



 

 

  
 

   
  


 
 





  
   
  
  

        ..    
Template Sequence  QLQEALLQQERPIRNSVDELNNNVEAVSQTSSSSFQYMYLLKDLWQKRQKQVKDNENVVNEYSSELEKHQLYID. . ETVN
Template Known Secondary structure  TTGGGTTTSSTT..
Template Predicted Secondary structure  ..
Template SS confidence 















































































   81........90.........100.........110.........120.........130.........140.........150.... ....
 
   152.......160.........170.........180......
Predicted Secondary structure 
Query SS confidence 


































Query Sequence  ASYNSQLVSLQTQPERVQNAMYNASQQLQQIRSRL
Query Conservation    
  

  

   
 

  
         
   
Alig confidence 


































Template Conservation     
 
 
 
   
  
  

  
 


  
 


Template Sequence  SNIPTNLRVLRSILENLRSKIQKLESDVSAQMEYC
Template Known Secondary structure  TT
Template Predicted Secondary structure 
Template SS confidence 


































   159160.........170.........180.........190...
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions