Job Description P77338 Confidence 42.88% Date Thu Jan 5 12:28:00 GMT 2012 Rank 138 Aligned Residues 314 % Identity 8% Template c3edvB_ PDB info PDB header:structural protein Chain: B: PDB Molecule:spectrin beta chain, brain 1; PDBTitle: crystal structure of repeats 14-16 of beta2-spectrin Resolution 1.95 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	F	V	F	S	A	F	I	A	F	V	F	V	L	L	C	Q	N	T	A	F	A	R	A	S	S	N	G	D	L	P	T	K	A	D	L	Q	A	Q	L	D	S	L	N	K	Q	K	D	L	S	A	Q	D	K	L	V	Q	Q	D	L	T	D	T	L	A	T	L	D	K	I	D	R	I	K	E	E	T	V	Q	L
Query Conservation
Alig confidence																																															.	.																			.	.	.	.	.	.
Template Conservation																																															.	.																			.	.	.	.	.	.
Template Sequence		F	Q	L	N	R	E	V	D	D	L	E	Q	W	I	A	E	R	E	V	V	A	G	S	H	E	L	G	Q	D	Y	E	H	V	T	M	L	Q	E	R	F	R	E	F	A	R	.	.	D	T	G	N	I	G	Q	E	R	V	D	T	V	N	H	L	A	D	.	.	.	.	.	.	E	L	I	N	S	G	H	S	D
Template Known Secondary structure																							T							S																	.	.																			.	.	.	.	.	.					T	T		T	T
Template Predicted Secondary structure																																															.	.																			.	.	.	.	.	.
Template SS confidence
		1701	.	.	.	.	.	.	.	.	1710	.	.	.	.	.	.	.	.	.	1720	.	.	.	.	.	.	.	.	.	1730	.	.	.	.	.	.	.	.	.	1740	.	.	.	.	.			.	.	.	.	1750	.	.	.	.	.	.	.	.	.	1760	.	.	.							.	.	.	.	.	.	1770	.	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Q	K	V	A	E	A	P	E	K	M	R	Q	A	T	A	A	L	T	A	L	S	D	V	D	N	D	E	E	T	R	K	I	L	S	T	L	S	L	R	Q	L	E	T	R	V	A	Q	A	L	D	D	L	Q	N	A	Q	N	D	L	A	S	Y	N	S	Q	L	V	S	L	Q	T	Q	P	E	R	V	Q	N	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	A	T	I	A	E	W	K	D	G	L	N	E	A	W	A	D	L	L	E	L	I	D	T	R	T	Q	I	L	A	A	S	Y	E	L	H	K	F	Y	H	D	A	K	E	I	F	G	R	I	Q	D	K	H	K	K	L	P	E	E	L	G	R	D	Q	N	T	V	E	T	L	Q	R	M	H	T	T	F	E	H	D
Template Known Secondary structure																																																								T							S	S
Template Predicted Secondary structure
Template SS confidence
		1773	.	.	.	.	.	.	1780	.	.	.	.	.	.	.	.	.	1790	.	.	.	.	.	.	.	.	.	1800	.	.	.	.	.	.	.	.	.	1810	.	.	.	.	.	.	.	.	.	1820	.	.	.	.	.	.	.	.	.	1830	.	.	.	.	.	.	.	.	.	1840	.	.	.	.	.	.	.	.	.	1850	.	.
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	Y	N	A	S	Q	Q	L	Q	Q	I	R	S	R	L	D	G	T	D	V	G	E	T	A	L	R	P	S	Q	K	V	L	M	Q	A	Q	Q	A	L	L	N	A	E	I	D	Q	Q	R	K	S	L	E	G	N	T	V	L	Q	D	T	L	Q	K	Q	R	D	Y	V	T	A	N	S	A	R	L	E	H	Q	L	Q
Query Conservation
Alig confidence																				.	.	.																																														.
Template Conservation																				.	.	.																																														.
Template Sequence		I	Q	A	L	G	T	Q	V	R	Q	L	Q	E	D	A	A	R	L	.	.	.	Q	A	A	Y	A	G	D	K	A	D	D	I	Q	K	R	E	N	E	V	L	E	A	W	K	S	L	L	D	A	C	E	S	R	R	V	R	L	V	D	T	G	D	K	F	R	.	F	F	S	M	V	R	D	L	M	L	W	M	E
Template Known Secondary structure																				.	.	.																																														.
Template Predicted Secondary structure																				.	.	.																																														.
Template SS confidence
		1853	.	.	.	.	.	.	1860	.	.	.	.	.	.	.	.	.	1870				.	.	.	.	.	.	.	.	.	1880	.	.	.	.	.	.	.	.	.	1890	.	.	.	.	.	.	.	.	.	1900	.	.	.	.	.	.	.	.	.	1910	.	.	.	.	.		.	.	.	.	1920	.	.	.	.	.	.	.	.
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	Q	E	A	V	N	S	K	R	L	T	L	T	E	K	T	A	Q	E	A	V	S	P	D	E	A	A	R	I	Q	A	N	P	L	V	K	Q	E	L	E	I	N	Q	Q	L	S	Q	R	L	I	T	A	T	E	N	G	N	Q	L	M	Q	Q	N	I	K	V	K	N	W	L	E	R	A	L	Q	S	E	R	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	V	I	R	Q	I	E	A	Q	E	K	P	R	D	V	S	S	V	E	L	L	M	N	N	H	Q	G	I	K	A	E	I	D	A	R	N	D	S	F	T	T	C	I	E	L	G	K	S	L	L	A	R	K	H	Y	A	S	E	E	I	K	E	K	L	L	Q	L	T	E	K	R	K	E	M	I	D	K	W	E	D
Template Known Secondary structure									T					S	S																				T	T																	T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		1929	1930	.	.	.	.	.	.	.	.	.	1940	.	.	.	.	.	.	.	.	.	1950	.	.	.	.	.	.	.	.	.	1960	.	.	.	.	.	.	.	.	.	1970	.	.	.	.	.	.	.	.	.	1980	.	.	.	.	.	.	.	.	.	1990	.	.	.	.	.	.	.	.	.	2000	.	.	.	.	.	.	.	.
		332	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	K	E	Q	I	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	W	E	W	L	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		2009	2010	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions