Job Description P77338 Confidence 86.71% Date Thu Jan 5 12:28:00 GMT 2012 Rank 51 Aligned Residues 38 % Identity 21% Template c2zkrt_ PDB info PDB header:ribosomal protein/rna Chain: T: PDB Molecule:rna expansion segment es39 part iii; PDBTitle: structure of a mammalian ribosomal 60s subunit within an2 80s complex obtained by docking homology models of the rna3 and proteins into an 8.7 a cryo-em map Resolution 8.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		945	.	.	.	.	950	.	.	.	.						.	.	.	.		.	960	.	.	.	.	.	.	.	.	.	970	.	.	.								.	.	.	.	.	.	980	.	.
Predicted Secondary structure												.	.	.	.	.					.																.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.					.																.	.	.	.	.	.	.
Query Sequence		P	V	R	I	G	D	T	V	T	I	.	.	.	.	.	G	S	F	S	.	G	T	V	S	K	I	R	I	R	A	T	T	I	T	D	.	.	.	.	.	.	.	F	D	R	K	E	V	I	I	P
Query Conservation												.	.	.	.	.					.																.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.					.																.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	I	R	K	D	D	E	V	Q	V	V	R	G	H	Y	K	G	Q	Q	I	G	K	V	V	Q	V	Y	R	K	K	Y	V	I	Y	I	E	R	V	Q	R	E	K	A	N	G	T	T	V	H	V	G
Template Known Secondary structure		B			T	T							S	S	T	T	T	T			S								T	T	T	T					T	T						S	S
Template Predicted Secondary structure
Template SS confidence
		48	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions