Job Description P77338 Confidence 87.84% Date Thu Jan 5 12:28:00 GMT 2012 Rank 50 Aligned Residues 97 % Identity 9% Template c2wpqA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:trimeric autotransporter adhesin fragment; PDBTitle: salmonella enterica sada 479-519 fused to gcn4 adaptors (2 sadak3, in-register fusion) Resolution 1.85 Å

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		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		I	D	R	I	K	E	E	T	V	Q	L	R	Q	K	V	A	E	A	P	E	K	M	R	Q	A	T	A	A	L	T	A	L	S	D	V	D	N	D	E	E	T	R	K	I	L	S	T	L	S	L	R	Q	L	E	T	R	V	A	Q	A	L	D	D	L	Q	N	A	Q	N	D	L	A	S	Y	N	S	Q	L	V	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	K	Q	I	E	D	K	I	E	E	I	L	S	K	I	Y	H	I	E	N	E	I	A	R	I	K	K	L	I	F	D	T	N	E	K	V	D	Q	N	T	A	D	I	T	T	N	T	N	S	I	N	Q	N	T	T	D	I	A	T	N	T	T	N	I	N	N	L	S	D	S	M	K	Q	I	E	D	K	I	E	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Q	T	Q	P	E	R	V	Q	N	A	M	Y	N	A	S	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	L	S	K	I	Y	H	I	E	N	E	I	A	R	I	K	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions