Job Description P77338 Confidence 34.38% Date Thu Jan 5 12:28:00 GMT 2012 Rank 161 Aligned Residues 212 % Identity 10% Template c2odvA_ PDB info PDB header:structural protein Chain: A: PDB Molecule:plectin 1; PDBTitle: crystal structure of a fragment of the plakin domain of plectin, cys2 to ala mutant. Resolution 2.05 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.		.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure																																															.
Query SS confidence																																															.
Query Sequence		H	F	V	F	S	A	F	I	A	F	V	F	V	L	L	C	Q	N	T	A	F	A	R	A	S	S	N	G	D	L	P	T	K	A	D	L	Q	A	Q	L	D	S	L	N	K	.	Q	K	D	L	S	A	Q	D	K	L	V	Q	Q	D	L	T	D	T	L	A	T	L	D	K	I	D	R	I	K	E	E	T	V	Q
Query Conservation																																															.
Alig confidence																																															.
Template Conservation
Template Sequence		Q	L	R	W	Q	E	Y	R	E	L	V	L	L	L	L	Q	W	M	R	H	H	T	A	A	F	E	E	R	F	P	S	S	F	E	E	I	E	I	L	W	S	Q	F	L	K	F	K	E	M	E	L	P	A	K	E	A	D	K	N	R	S	K	G	I	Y	Q	S	L	E	G	A	V	Q	A	G	Q	L	K	V	P
Template Known Secondary structure																																S	S																		T																								T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.			.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																				.	.
Query SS confidence																																																																				.	.
Query Sequence		L	R	Q	K	V	A	E	A	P	E	K	M	R	Q	A	T	A	A	L	T	A	L	S	D	V	D	N	D	E	E	T	R	K	I	L	S	T	L	S	L	R	Q	L	E	T	R	V	A	Q	A	L	D	D	L	Q	N	A	Q	N	D	L	A	S	Y	N	S	.	.	Q	L	V	S	L	Q	T	Q	P	E	R	V
Query Conservation																																																																				.	.
Alig confidence																																																																				.	.
Template Conservation
Template Sequence		P	G	Y	H	P	L	D	V	E	K	E	W	G	K	L	H	V	A	I	L	E	R	E	K	Q	L	R	S	E	F	E	R	L	E	A	L	Q	R	I	V	T	K	L	Q	M	E	A	G	L	A	E	E	Q	L	N	Q	A	D	A	L	L	Q	S	D	V	R	L	L	A	A	G	K	V	P	Q	R	A	G	E	V
Template Known Secondary structure		T	T		S																																																																T	T	T	T				S
Template Predicted Secondary structure
Template SS confidence
		386	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	N	A	M	Y	N	A	S	Q	Q	L	Q	Q	I	R	S	R	L	D	G	T	D	V	G	E	T	A	L	R	P	S	Q	K	V	L	M	Q	A	Q	Q	A	L	L	N	A	E	I	D	Q	Q	R	K	S	L	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	R	D	L	D	K	A	D	S	M	I	R	L	L	F	N	D	V	Q	T	L	K	D	G	R	H	P	Q	G	E	Q	M	Y	R	R	V	Y	R	L	H	K	R	L	V	A	I	R	T	E	Y	N	L	R	L	K
Template Known Secondary structure																									T	T		T	T																										T
Template Predicted Secondary structure
Template SS confidence
		466	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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