Job Description P77338 Confidence 81.57% Date Thu Jan 5 12:28:00 GMT 2012 Rank 56 Aligned Residues 339 % Identity 9% Template c2j69D_ PDB info PDB header:hydrolase Chain: D: PDB Molecule:bacterial dynamin-like protein; PDBTitle: bacterial dynamin-like protein bdlp Resolution 3.0 Å

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		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	I	L	S	T	L	S	L	R	Q	L	E	T	R	V	A	Q	A	L	D	D	L	Q	N	A	Q	N	D	L	A	S	Y	N	S	Q	L	V	S	L	Q	T	Q	P	E	R	V	Q	N	A	M	Y	N	A	S	Q	Q	L	Q	Q	I	R	S	R	L	D	G	T	D	V	G	E	T	A	L	R	P	S	Q	K	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	P	K	F	M	D	S	L	N	T	F	L	T	R	E	R	A	I	A	E	L	R	Q	V	R	T	L	A	R	L	A	C	N	H	T	R	E	A	V	A	R	R	I	P	L	L	E	Q	D	V	N	E	L	K	K	R	I	D	S	V	E	P	E	F	N	K	L	T	G	I	R	D	E	F	Q	K	E	I	I	N
Template Known Secondary structure																T																															S	S	S		S
Template Predicted Secondary structure
Template SS confidence
		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.														.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	M	Q	A	Q	Q	A	L	L	N	A	E	I	D	Q	Q	R	K	S	L	E	G	N	T	V	L	Q	D	T	L	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	K	Q	R	D	Y	V	T	A	N	S	A	R	L	E	H	Q	L	Q	L	L	Q	E	A	V	N	S	K	R	L	T	L	T	E	K	T	A
Query Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	R	D	T	Q	A	R	T	I	S	E	S	F	R	S	Y	V	L	N	L	G	N	T	F	E	N	D	F	L	R	Y	Q	P	E	L	N	L	F	D	F	L	S	S	G	K	R	E	A	F	N	A	A	L	Q	K	A	F	E	Q	Y	I	T	D	K	S	A	A	W	T	L	T	A	E	K	D	I	N	A	A	F
Template Known Secondary structure																			T	T	T	T	T	T	T					T	T	T						G	G	G	G	G	S	T	T
Template Predicted Secondary structure
Template SS confidence
		392	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.
		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.											.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	E	A	V	S	P	D	E	A	A	R	I	Q	A	N	P	L	V	K	Q	E	L	E	I	N	Q	.	.	.	.	.	.	.	.	.	.	Q	L	S	Q	R	L	I	T	A	T	E	N	G	N	Q	L	M	Q	Q	N	I	K	V	K	N	W	L	E	R	A	L	Q	S	E	R	N	I	K	E	Q	I	A	V	L
Query Conservation																												.	.	.	.	.	.	.	.	.	.
Alig confidence																												.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	E	L	S	R	S	A	S	Q	Y	G	A	S	Y	N	Q	I	T	D	Q	I	T	E	K	L	T	G	K	D	V	E	E	D	N	S	P	G	W	A	K	W	A	M	G	L	L	S	A	G	F	D	W	K	N	I	L	L	N	Y	F	T	V	I	G	I	G	G	I	I	T	A	V	T	G	I	L	L	G	P	I
Template Known Secondary structure																												S	S																T	S					S												T	T		S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		472	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.
		340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.		.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																.
Query SS confidence																																																.
Query Sequence		K	G	S	L	L	L	S	R	I	L	Y	Q	Q	Q	Q	T	L	P	S	A	D	E	L	E	N	M	T	N	R	I	A	D	L	R	L	E	Q	F	E	V	N	Q	Q	R	D	A	.	L	F	Q	S	D	A	F	V	N	K	L	E	E	G	H	T	N	E	V	N	S	E	V	H	D	A	L	L	Q	V	V	D	M
Query Conservation																																																.
Alig confidence																																																.
Template Conservation
Template Sequence		G	F	A	L	L	G	L	G	V	G	F	L	Q	A	D	Q	A	R	R	E	L	V	K	T	A	K	K	E	L	V	K	H	L	P	Q	V	A	H	E	Q	S	Q	V	V	Y	N	A	V	K	E	C	F	D	S	Y	E	R	E	V	S	K	R	I	N	D	D	I	V	S	R	K	S	E	L	D	N	L	V	K	Q
Template Known Secondary structure								T	T	T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		573	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.
		419	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	R	E	L	L	D	Q	L	N	K	Q	L	G	N	Q	L	M	M	A	I	N	L	Q	I	N	Q	Q	Q	L	M	S	V	S	K	N	L	K	S	I	L	T	Q	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	Q	T	R	E	I	N	R	E	S	E	F	N	R	L	K	N	L	Q	E	D	V	I	A	Q	L	Q	K	I	E	A	A	Y	S	N	L	L	A	Y	Y	S	H	H
Template Known Secondary structure				S																																							T
Template Predicted Secondary structure
Template SS confidence
		653	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions