Return to main results Retrieve Phyre Job Id

Job DescriptionP77338
Confidence55.79%DateThu Jan 5 12:28:00 GMT 2012
Rank93Aligned Residues87
% Identity8%Templatec2eqbC_
PDB info PDB header:endocytosis/exocytosisChain: C: PDB Molecule:rab guanine nucleotide exchange factor sec2; PDBTitle: crystal structure of the rab gtpase sec4p, the sec2p gef2 domain, and phosphate complex
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   129130.........140.........150.........160.........170.........180.........190.........200........
Predicted Secondary structure 
Query SS confidence 















































































Query Sequence  SLRQLETRVAQALDDLQNAQNDLASYNSQLVSLQTQPERVQNAMYNASQQLQQIRSRLDGTDVGETALRPSQKVLMQAQQ
Query Conservation   
 


  
      
  

  
  
  

  

   
 

  
         
   
           
     

   
Alig confidence 















































































Template Conservation    
 

    

  


    
   
   
  
   
  

     

 













 


 

      
 
 
Template Sequence  NYNQLKEDYNTLKRELSDRDDEVKRLREDIAKENELRTKAEEEADKLNKEVEDLTASLFDEANNMVADARKEKYAIEILN
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 















































































   51........60.........70.........80.........90.........100.........110.........120.........130
 
   209210.....
Predicted Secondary structure 
Query SS confidence 






Query Sequence  ALLNAEI
Query Conservation    
  
 
Alig confidence 






Template Conservation    
 
 
Template Sequence  KRLTEQL
Template Known Secondary structure  T
Template Predicted Secondary structure 
Template SS confidence 






   131......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions