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Job DescriptionP77338
Confidence66.15%DateThu Jan 5 12:28:00 GMT 2012
Rank76Aligned Residues234
% Identity10%Templatec1quuA_
PDB info PDB header:contractile proteinChain: A: PDB Molecule:human skeletal muscle alpha-actinin 2; PDBTitle: crystal structure of two central spectrin-like repeats from2 alpha-actinin
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   118.120.........130.........140.........150..... ....160.........170.........180.........190.
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Query Sequence  DEETRKILSTLSLRQLETRVAQALDDLQNAQNDLASYN. . . . . . SQLVSLQTQPERVQNAMYNASQQLQQIRSRLDGTDV
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Template Sequence  NEIRRLERLEHLAEKFRQKASTHETWAYGKEQILLQKDYESASLTEVRALLRKHEAFESDLAAHQDRVEQIAAIAQELNE
Template Known Secondary structure  TTTTT



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   4.....10.........20.........30.........40.........50.........60.........70.........80...
 
   192.......200.........210.........220.........230.........240.........250.........260........
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Query Sequence  . . . GETALRPSQKVLMQAQQALLNAEIDQQRKSLEGNTVLQDTLQKQRDYVTANSARLEHQLQLLQEAVNSKRLTLTEKT
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Template Sequence  LDYHDAVNVNDRCQKICDQWDRLGTLTQKRREALERMEKLLETIDQLHLEFAKRAAPFNNWMEGAMEDLQDMFIVHSIEE
Template Known Secondary structure  TT
TTTTTT





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   84.....90.........100.........110.........120.........130.........140.........150.........160...
 
   269270.........280.........290.........300.........310.........320.........330.........340........
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Query Sequence  AQEAVSPDEAARIQANPLVKQELEINQQLSQRLITATENGNQLMQQNIKVKNWLERALQSERNIKEQIAVLKGSLLLSRI
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Template Sequence  IQSLITAHEQFKATLPEADGERQSIMAIQNEVEKVIQSYNIRISSSNPYSTVTMDELRTKWDKVKQLVPIRDQSLQEELA
Template Known Secondary structure  TS
TTS

S
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   164.....170.........180.........190.........200.........210.........220.........230.........240...
 
   349350.
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Query Sequence  LYQ
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Template Sequence  RQH
Template Known Secondary structure  S
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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