Job Description P77338 Confidence 51.18% Date Thu Jan 5 12:28:00 GMT 2012 Rank 109 Aligned Residues 184 % Identity 9% Template c1mhsA_ PDB info PDB header:membrane protein, proton transport Chain: A: PDB Molecule:plasma membrane atpase; PDBTitle: model of neurospora crassa proton atpase Resolution 8.00 Å

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		554	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I	D	L	I	R	A	L	P	V	C	L	I	I	L	A	V	G	L	I	L	L	T	M	Q	L	N	I	S	E	L	L	W	S	F	S	K	K	L	A	I	F	W	L	V	F	G	L	C	W	K	V	L	E	K	N	G	V	A	V	R	H	F	G	M	P	E	Q	Q	T	S	H	W	R	R	Q	I	V	R	I
Query Conservation
Alig confidence																																																	.	.	.	.	.
Template Conservation																																																	.	.	.	.	.
Template Sequence		Y	V	V	Y	R	I	A	L	S	I	H	L	E	I	F	L	G	L	W	I	A	I	L	N	R	S	L	N	I	E	L	V	V	F	I	A	I	F	A	D	V	A	T	L	A	I	A	.	.	.	.	.	Y	D	N	A	P	Y	S	Q	T	P	V	K	W	N	L	P	K	L	W	G	M	S	V	L	L	G	V	V
Template Known Secondary structure																							S		S																T	T							.	.	.	.	.				S	G	G	G	G	S						S	S	S		S	S
Template Predicted Secondary structure																																																	.	.	.	.	.
Template SS confidence
		691	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.						.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.
		634	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	A	L	L	P	I	H	F	W	S	V	V	A	E	L	S	P	L	H	L	M	D	D	V	L	G	Q	A	M	I	F	F	N	L	L	L	I	A	F	L	V	W	P	M	C	R	E	S	W	R	D	K	E	S	H	T	M	R	L	V	T	I	T	V	L	S	I	I	P	I	A	L	M	V	L	T	A	T	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	A	V	G	T	W	I	T	V	T	T	M	Y	A	Q	G	E	N	G	G	I	V	Q	N	F	G	N	M	D	E	V	L	F	L	Q	I	S	L	T	E	N	W	L	I	F	I	T	R	A	N	G	P	F	W	S	S	I	P	S	W	Q	L	S	G	A	I	F	L	V	D	I	L	A	T	C	F	T	I	W	G
Template Known Secondary structure														T	T	T	T	T	T			S	S	S	S	S	S	S																	T	T	S	S	S		S	S	S		S			S		T																			S	S	S
Template Predicted Secondary structure
Template SS confidence
		766	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.
		714	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	F	Y	T	T	L	R	L	A	G	R	W	I	E	T	V	Y	L	V	I	I	W	N	L	L	Y	Q	T	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		W	F	E	H	S	D	T	S	I	V	A	V	V	R	I	W	I	F	S	F	G	I	F	C	I	M	G	G	V
Template Known Secondary structure		S	T	T	S		S					T								T	T
Template Predicted Secondary structure
Template SS confidence
		846	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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