 |
Job Description | P76154 | Confidence | 2.07% | Date | Thu Jan 5 12:19:46 GMT 2012 |
Rank | 85 | Aligned Residues | 53 |
% Identity | 26% | Template | c1qhiA_ |
PDB info |
PDB header:transferase | Chain: A: PDB Molecule:protein (thymidine kinase); |
PDBTitle: herpes simplex virus type-i thymidine kinase complexed with2 a novel non-substrate inhibitor, 9-(4-hydroxybutyl)-n2-3 phenylguanine
|
Resolution | 1.90 Å |
|
  |   |
7 | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 |
Predicted Secondary structure |   |
|  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | K | W | F | P | A | Q | L | P | E | V | R | I | I | L | G | D | A | V | V | E | V | A | . |
. |
. |
. |
. |
K | Q | G | R | P | I | N | T | R | T | L | L | D | Y | I | E | G | N | I | K | K | K | S | W | L | D | N | K | E | L | L |
Query Conservation |   |
|   |
|   |
|
|
|
|
|   |
|   |
|
|
|
|   |
|
|   |   |
|   | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|   |
|   |   |   |   |   |   |
|   |   |   |   |
|   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |   |   |
|   |
|
|
|
|
|
|
|   |
|
|
|
|   |   |
|   |
|
|
|
|
|
|
|   |   |
|   | . |
|
|
|   |
|
|   |   |
|   |
|   |
|   |   |
|   |
|
|   |   |   |
Template Sequence |   |
V | A | L | I | P | P | T | L | P | G | T | N | I | V | L | G | A | L | P | E | D | R | H | I | D | R | L | A | K | R | Q | R | P | G | E | R | . |
L | D | L | A | M | L | A | A | I | R | R | V | Y | G | L | L | A | N | T | V | R | Y |
Template Known Secondary structure |   |
 |  | T |
|
|
|
|
| T | T |
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
| T | T |
|
| . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
| . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
191 | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | |
. | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|