Job Description P26612 Confidence 99.96% Date Thu Jan 5 11:42:59 GMT 2012 Rank 107 Aligned Residues 217 % Identity 15% Template d1iv8a2 SCOP info TIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain Resolution 1.90

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		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	K	L	W	P	E	L	A	E	R	A	D	G	F	N	D	I	G	I	N	M	V	W	L	P	P	A	Y	K	G	A	S	G	G	Y	S	V	G	Y	D	S	Y	D	L	F	D	L	G	E	F	D	Q	K	G	S	I	P	T	K	Y	G	D	K	A	Q	L	L	A	A	I	D	A	L	K	R	N	D	I	A	V
Query Conservation
Alig confidence																.																				.											.	.	.	.	.	.	.	.	.
Template Conservation																.																				.											.	.	.	.	.	.	.	.	.
Template Sequence		N	F	N	F	G	D	V	I	D	N	L	W	Y	F	.	D	L	G	V	S	H	L	Y	L	S	P	V	L	M	A	S	P	G	S	.	N	H	G	Y	D	V	I	D	H	S	.	.	.	.	.	.	.	.	.	R	I	N	D	E	L	G	G	E	K	E	Y	R	R	L	I	E	T	A	H	T	I	G	L	G	I
Template Known Secondary structure		T	B								T	T	T	T		.																	T	T		.	S	S			S						.	.	.	.	.	.	.	.	.				T	T	T	T															T	T
Template Predicted Secondary structure																.																				.											.	.	.	.	.	.	.	.	.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.		.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.		.	.	.	.	50	.	.	.	.	.										.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.										.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.
Query SS confidence																																						.	.	.	.	.	.	.	.	.
Query Sequence		L	L	D	V	V	V	N	H	K	M	G	A	D	E	K	E	A	I	R	V	Q	R	V	N	A	D	D	R	T	Q	I	D	E	E	I	I	.	.	.	.	.	.	.	.	.	E	C	E	G	W	T	R	Y	T	F	P	A	R	A	G	Q	Y	S	Q	F	I	W	D	F	K	C	F	S	G	I	D	H	I	E	N
Query Conservation																																						.	.	.	.	.	.	.	.	.
Alig confidence																																						.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	Q	D	I	V	P	N	H	M	A	V	N	S	L	N	W	R	L	M	D	V	L	M	G	S	Y	Y	T	Y	F	D	F	F	P	E	D	D	K	I	R	L	P	I	L	G	E	D	L	D	T	V	I	S	K	G	L	L	K	I	V	K	D	G	D	E	Y	F	L	E	Y	F	K	W	K	L	P	L	T	E	V
Template Known Secondary structure								S						T	T													G	G	G	B		B		T	T		S	S							S	S								T	T								S	S							T	T						S
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240			.	.	.	.	.	.
Predicted Secondary structure																																																																										.	.
Query SS confidence																																																																										.	.
Query Sequence		P	D	E	D	G	I	F	K	I	V	N	D	Y	T	G	E	G	W	N	D	Q	V	D	D	E	L	G	N	F	D	Y	L	M	G	E	N	I	D	F	R	N	H	A	V	T	E	E	I	K	Y	W	A	R	W	V	M	E	Q	T	Q	C	D	G	F	R	L	D	A	V	K	H	I	.	.	P	A	W	F	Y	K
Query Conservation																																																																										.	.
Alig confidence																								.																			.											.	.	.	.	.																.	.
Template Conservation																								.																			.											.	.	.	.	.
Template Sequence		G	N	D	I	Y	D	T	L	Q	K	Q	N	Y	T	L	M	S	W	K	N	P	P	.	S	Y	R	R	F	F	D	V	N	T	L	I	G	V	N	V	E	D	.	H	V	F	Q	E	S	H	S	I	L	.	.	.	.	.	D	L	D	V	D	G	Y	R	I	D	H	I	D	G	L	Y	D	P	E	K	Y	I	N
Template Known Secondary structure			S	S						T	T	S	S						T	T	S			.	S	B				T	T							B					.							T			T	.	.	.	.	.	T	S			S					T	T	G	G	G		S
Template Predicted Secondary structure																								.																			.											.	.	.	.	.
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.		.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.		.	.	.	210	.	.	.	.	.	.						.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		247	.	.	250	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	W	I	E	H	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	L	R	S	I	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		242	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions