Job Description P26612 Confidence 100.00% Date Thu Jan 5 11:42:59 GMT 2012 Rank 92 Aligned Residues 322 % Identity 20% Template d1ea9c3 SCOP info TIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain Resolution 3.2

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		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	K	L	W	P	E	L	A	E	R	A	D	G	F	N	D	I	G	I	N	M	V	W	L	P	P	A	Y	K	G	A	S	G	G	Y	S	V	G	Y	D	S	Y	D	L	F	D	L	G	E	F	D	Q	K	G	S	I	P	T	K	Y	G	D	K	A	Q	L	L	A	A	I	D	A	L	K	R	N	D	I	A	V
Query Conservation
Alig confidence																																		.	.	.											.	.	.	.	.	.	.	.	.
Template Conservation																																		.	.	.											.	.	.	.	.	.	.	.	.
Template Sequence		G	G	D	L	Q	G	V	I	D	H	L	D	H	L	S	K	L	G	V	N	A	V	Y	F	T	P	L	F	K	A	T	T	.	.	.	N	H	K	Y	D	T	E	D	Y	F	.	.	.	.	.	.	.	.	.	Q	I	D	P	Q	F	G	D	K	D	T	L	K	K	L	V	D	L	C	H	E	R	G	I	R	V
Template Known Secondary structure											T								T		S								S	S		S	S	.	.	.	S	S	T	T	S		S		T	T	.	.	.	.	.	.	.	.	.				T	T	T														T	T	T	T
Template Predicted Secondary structure																																		.	.	.											.	.	.	.	.	.	.	.	.
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.				200	.	.	.	.	.	.	.	.	.										210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	D	V	V	V	N	H	K	M	G	A	D	E	K	E	A	I	R	V	Q	R	V	N	A	D	D	R	T	Q	I	D	E	E	I	I	E	C	E	G	W	T	R	Y	T	F	P	A	R	A	G	Q	Y	S	Q	F	I	W	D	F	K	C	F	S	G	I	D	H	I	E	N	P	D	E	D	G	I	F	K	I
Query Conservation
Alig confidence																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	L	D	A	V	F	N	H	S	G	R	T	F	P	P	F	V	D	V	L	K	N	G	E	K	S	K	Y	K	D	W	F	H	I	R	S	L	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure								S	B			T	T	T								T	T	T	T	T		T	T	T	T	S	S		B		S	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	N	D	Y	T	G	E	G	W	N	D	Q	V	D	D	E	L	G	N	F	D	Y	L	M	G	E	N	I	D	F	R	N	H	A	V	T	E	E	I	K	Y	W	A	R	W	V	M	E	Q	T	Q	C	D	G	F	R	L	D	A	V	K	H	I	P	A	W	F	Y	K	E	W	I	E	H	V	Q	E	V	A	P
Query Conservation
Alig confidence		.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	L	E	V	V	D	G	I	P	T	Y	D	T	F	A	F	E	P	L	M	P	K	L	N	T	E	H	P	D	V	K	E	Y	L	L	K	A	A	E	Y	W	I	R	E	T	G	I	D	G	W	R	L	D	V	A	N	E	V	S	H	Q	F	W	R	E	F	R	R	V	V	K	Q	A	N	P
Template Known Secondary structure		.	.	.	.	.	.				T	T	S			S	B		B	S	S	S		T	T	S	B	B			T	T	S																					S					T	T		T	T	S																	T
Template Predicted Secondary structure		.	.	.	.	.	.
Template SS confidence
								274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.						.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
Predicted Secondary structure																																																				.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.
Query Sequence		K	P	L	F	I	V	A	E	Y	W	S	H	E	V	D	K	L	Q	T	Y	I	D	Q	V	E	G	K	T	M	L	F	D	A	P	L	Q	M	K	F	H	E	A	S	R	M	G	R	D	Y	D	.	.	.	.	.	M	T	Q	I	F	T	G	T	L	V	E	A	D	P	F	H	A	V	T	L	V	A	N	H	D
Query Conservation																																																				.	.	.	.	.
Alig confidence		.																			.	.	.	.	.																											.	.	.	.	.
Template Conservation		.																			.	.	.	.	.
Template Sequence		.	D	A	Y	I	L	G	E	V	W	H	E	S	S	I	W	L	E	G	.	.	.	.	.	D	Q	F	D	A	V	M	N	Y	P	F	T	N	A	V	L	D	F	F	I	H	Q	I	A	D	A	E	K	F	S	F	M	L	G	K	Q	L	A	G	Y	P	R	Q	A	S	E	V	M	F	N	L	L	D	S	H	D
Template Known Secondary structure		.	T									S			T	T	T	T	T	T	.	.	.	.	.	T	S		S			B												T	T	S			S												T	T	T	T	S							T					S			T	T
Template Predicted Secondary structure		.																			.	.	.	.	.
Template SS confidence
			348	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.						.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.
		333	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.						390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.
Predicted Secondary structure																																																											.	.	.	.	.
Query SS confidence																																																											.	.	.	.	.
Query Sequence		T	Q	P	L	Q	A	L	E	A	P	V	E	P	W	F	K	P	L	A	Y	A	L	I	L	L	R	E	N	G	V	P	S	V	F	Y	P	D	L	Y	G	A	H	Y	E	D	V	G	G	D	G	Q	T	Y	P	I	D	M	.	.	.	.	.	P	I	I	E	Q	L	D	E	L	I	L	A	R	Q	R	F	A	H
Query Conservation																																																											.	.	.	.	.
Alig confidence												.	.																																														.	.	.	.	.
Template Conservation												.	.
Template Sequence		T	A	R	L	L	T	Q	A	D	G	.	.	D	K	R	K	M	K	L	A	V	L	F	Q	F	T	Y	F	G	T	P	C	I	Y	Y	G	D	E	V	G	L	D	G	G	H	D	P	G	C	R	K	C	M	E	W	D	E	T	K	H	D	K	D	L	F	A	F	Y	Q	T	V	I	R	L	R	Q	A	H	A	A
Template Known Secondary structure		S									S	.	.													T	T	S	S	S						S	S		S	S						S					T							T	T	S																				S
Template Predicted Secondary structure												.	.
Template SS confidence
		422	.	.	.	.	.	.	.	430	.			.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions