Return to main results Retrieve Phyre Job Id

Job DescriptionP26612
Confidence94.21%DateThu Jan 5 11:42:59 GMT 2012
Rank213Aligned Residues76
% Identity17%Templated1bf2a2
SCOP infoGlycosyl hydrolase domain Glycosyl hydrolase domain alpha-Amylases, C-terminal beta-sheet domain
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   416...420.........430 .........440.........450.........460...... ...470.........480..
Predicted Secondary structure 






.















............






Query SS confidence 














.



































. . . . . . . . . . . .















Query Sequence  HPNCIAFSRSGTDEF. PGCVVVMSNGDDGEKTIHLGENYGNKTWRDFLGNRQ. . . . . . . . . . . . ERVVTDENGEATFFCN
Query Conservation     
  
 
      .    

 

         
     
    
 
    ............  
     
     
 
Alig confidence 














.



































............









.




Template Conservation    
 

  
 
     
  
 
 


      
 

    
  
    


     
     
         
 . 
 
 
Template Sequence  SNYAIAYAINGPSLGDSNSIYVAYNGWSSSVTFTLPAPPSGTQWYRVTDTCDWNDGASTFVAPGSETLIGGAGT. TYGQC
Template Known Secondary structure  T


GGGGT
SS

SSS




SSSS

SGGG
STTSB

TT

STT
.
Template Predicted Secondary structure 
















































.
Template SS confidence 















































































   662.......670.........680.........690.........700.........710.........720.........730..... ....740
 
   483......490..
Predicted Secondary structure 

Query SS confidence 









Query Sequence  GGSVSVWVIE
Query Conservation    
  
    
Alig confidence 









Template Conservation   

 



 
Template Sequence  GQSLLLLISK
Template Known Secondary structure  SS
Template Predicted Secondary structure 


Template SS confidence 









   741........750
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions