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Job DescriptionP26612
Confidence100.00%DateThu Jan 5 11:42:59 GMT 2012
Rank45Aligned Residues412
% Identity18%Templatec3czkA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:sucrose hydrolase; PDBTitle: crystal structure analysis of sucrose hydrolase(suh) e322q-2 sucrose complex
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   18.20.........30.........40.........50.........60.........70.........80.........90.......
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Query Sequence  GKLWPELAERADGFNDIGINMVWLPPAYKGASGGYSVGYDSYDLFDLGEFDQKGSIPTKYGDKAQLLAAIDALKRNDIAV
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Template Sequence  AGTLQGVAERVPYLQELGVRYLHLLPFLRARAGDNDGGFAVSDYG. . . . . . . . . QVEPSLGSNDDLVALTSRLREAGISL
Template Known Secondary structure  SSTT
S



SS

TTTTS.........
TTT

TT
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   102.......110.........120.........130.........140...... ...150.........160.........170..
 
   98.100.........110.........120.........130.........140.........150.........160.........170.......
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Query Sequence  LLDVVVNHKMGADEKEAIRVQRVNADDRTQIDEEIIECEGWTRYTFPARAGQYSQFIWDFKCFSGIDHIENPDEDGIFKI
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Template Sequence  CADFVLNHTA. . DDHAWAQAARAGDARYLDYY. . . . . . . . . . . . . . . . . . . . . . . . . . . HHFADRTVPDRYEATLGQVFP
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S..TTSTT
TTB...........................
SSS


SBT
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   173......180.. .......190.........200.. .......210.........220...
 
   178.180.........190.........200.........210.........220.........230.........240 ....
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Query Sequence  VNDYTGEGWNDQVDDELGNFDYLMGENIDFRNHAVTEEIKYWARWVMEQTQCDGFRLDAVKHI. . . . . . . . . . . . . PAWF
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Template Sequence  HTAPGNFTWVDDTAQWMWTTFYPYQWDLNWSNPAVFGDMALAMLRLA. NLGVEAFRLDSTAYLWKRIGTDCMNQSEAHTL
Template Known Secondary structure  TTB

STTTT
SSSTTB
TTS.TT

TTTTSS


TTS
SSS
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   224.....230.........240.........250.........260.........270 .........280.........290.........300..
 
   245....250.........260.........270.........280. ........290.........300.........310.........320.
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Query Sequence  YKEWIEHVQEVAPKPLFIVAEYWSHEVDKLQTYIDQV. . . EGKTMLFDAPLQMKFHEASRMGRDYDMTQIFTGTLVEADP
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Template Sequence  LVALRAVTDIVAP. AVVMKAQAIVPMTQLPPYFGSGVDEGHECHLAYHSTLMAAGWSALALQRGDILHNVIAHSPPLPRH
Template Known Secondary structure 
T.T





GGGSGGGG

GGGTTSS
S
T
TTS



TT
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   303......310..... ....320.........330.........340.........350.........360.........370.........380.
 
   322.......330......... 340
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Query Sequence  FHAVTLVANHDTQPLQAL. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . E
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Template Sequence  CAWLSYVRCHDDIGWNVLQHEACGNAAQPPFSLRDVARFYANAVPGSYARGESFQGVHGTNGMAAALAGIQAAQEAGDAA
Template Known Secondary structure 
S

SS
GGGGT

SSS



T
STT










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   382.......390.........400.........410.........420.........430.........440.........450.........460.
 
   341........350.........360.........370.........380 ....... ..390......
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Query Sequence  APVEPWFKPLAYALILLRENGVPSVFYPDLYGAHYEDVGG. . . . . . . . . . . . DGQTYPI. . . . . . . . . . . . DMPIIEQLD
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Template Sequence  ALAVAVDRLVLLYAIALAMPGVPLIYMGDELAMVNDPGYRDDPHRQHEGRWLHRPAMDWQLAAQRHDAKSLSGTVYRRLR
Template Known Secondary structure  SSTTGGGT



GGGGG
TTTTT
GGGGG




TTS
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   466...470.........480.........490.........500.........510.........520.........530.........540.....
 
   397..400....... ..410........ .420.........430.........440.........450.........460.........470.
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Query Sequence  ELILARQRFAH. . . GVQTLFFDHPN. . CIAFSRSGTDEFPGCVVVMSNGDDGEKTIHLGENYGNKTWRDFLGNRQERVVT
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Template Sequence  GLIRQRAALGALAADQALASIALNDPRVFALTR. . GDS. . . . FIALHNFSDQLLDVELAAIGVDGW. . . . . . . . . . . . . T
Template Known Secondary structure  T
GGGSTTS



S
TT..TTT....
SSS

GGGTT


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   546...550.........560.........570........ .580. ........590.........600..... .
 
   472.......480........
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Query Sequence  DENGEATFFCNGGSVSV
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Template Conservation         
 
 
    
Template Sequence  LLRGDGSIVLPPYGVRW
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   607..610.........620...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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