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Job DescriptionP26612
Confidence100.00%DateThu Jan 5 11:42:59 GMT 2012
Rank73Aligned Residues419
% Identity19%Templatec2fhfA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:pullulanase; PDBTitle: crystal structure analysis of klebsiella pneumoniae2 pullulanase complexed with maltotetraose
Resolution1.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10........ .20....... ..30.........40.........
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Query Sequence  PTLLQCFHWYYPEGG. . . . KLWPELAER. . . . . . . ADGFNDIGINMVWLPPAYKGAS. . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  ESHIRDLSAWDQTVPAELRGKYLALTAQESNMVQHLKQLSASGVTHIELLPVFDLATVNEFSDKVADIQQPFSRLCEVNS
Template Known Secondary structure 
TT
TTS
GGGTTSGGGGG
TTST

S

SSS


GGG


TTSB
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   428.430.........440.........450.........460.........470.........480.........490.........500.......
 
   50.........60.........70.........80..
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . GGYSVGYDSYDLFDLGEFDQKGSIPTKYGDKAQ. .
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Template Sequence  AVKSSEFAGYCDSGSTVEEVLTQLKQNDSKDNPQVQALNTLVAQTDSYNWGYDPFHYT. . . . . . . . . VPEGSYATDPEGT
Template Known Secondary structure  TSTTGGGTTSS
BSTT
BTTB
TTSSS





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STTSS

STT
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   508.510.........520.........530.........540.........550.........560..... ....570........
 
   83......90.. .......100.........110.........120.........130.........140.........150......
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Query Sequence  . . . . . LLAAIDALKR. NDIAVLLDVVVNHKMGADEKEAIRVQRVNADDRTQIDEEIIECEGWTRYTFPARAGQYSQFIWD
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Template Sequence  ARIKEFRTMIQAIKQDLGMNVIMDVVYNHTNAAGPTDRTSVLDKIVPWYYQRLNETTGSVES. . . . . . . . . . . . . . . . . .
Template Known Secondary structure  TS


TTS

SSS
TT

STTTSB
B
TTT

B

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   579580.........590.........600.........610.........620.........630.........640
 
   157..160.........170.........180.........190.........200.........210.........220.........230......
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Query Sequence  FKCFSGIDHIENPDEDGIFKIVNDYTGEGWNDQVDDELGNFDYLMGENIDFRNHAVTEEIKYWARWVMEQTQCDGFRLDA
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ATCCSDSAPEHRMFAKLIADSLAVWTTDYKIDGFRFDL
Template Known Secondary structure  ..........................................TTSSB
TTS


TT
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   641........650.........660.........670........
 
   237..240.........250.........260.........270.........280. ........290.........300.........310...
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Query Sequence  VKHIPAWFYKEWIEHVQEVAPKPLFIVAEYWSHEVDKLQTYIDQV. . . EGKTMLFDAPLQMKFHEASRMGRDYDMTQIFT
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Template Sequence  MLYHPKAQILSAWERIKALNP. DIYFFGEGWDSNQSDRFEIASQINLKGTGIGTFSDRLRDAVRGGGPFDSGDALRQNQG
Template Known Secondary structure  GGGSBTT
T.T





S
TTTS
B

TTTTTTSS


S
TT

TT


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   679680.........690......... 700.........710.........720.........730.........740.........750.......
 
   314... ..320.........330.....
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Query Sequence  GTLV. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . EADPFHAVTLVANHDTQP
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Template Sequence  VGSGAGVLPNELTTLSDDQARHLADLTRLGMAGNLADFVLIDKDGAVKRGSEIDYNGAPGGYAADPTEVVNYVSKHDNQT
Template Known Secondary structure  GGGTTTTS

SS



TT
BTT

TTS
GGGSTTS

BSSGGG
S

SSSS
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   758.760.........770.........780.........790.........800.........810.........820.........830.......
 
   336...340..... ....350.........360.........370.........380 ........
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Query Sequence  LQALEAPVEP. . . . . . . . WFKPLAYALILLRENGVPSVFYPDLYGAHYEDVGG. . . . . . DGQTYPID. . . . . . . . . . . . .
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Template Sequence  LWDMISYKAAQEADLDTRVRMQAVSLATVMLGQGIAFDQQGSELLRSKSFTRDSYDSGDWFNRVDYSLQDNNYNVGMPRS
Template Known Secondary structure  S
TT

TSSSTTGGGT


TT
S

TTS


TT
S

S
SSS


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   838.840.........850.........860.........870.........880.........890.........900.........910.......
 
   389390.........400.........410.. .......420.........
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . MPIIEQLDELILARQRFAHGVQTL. . . . . . . . . . . . . . FFDHPNCIAFSRSGTDE
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Template Sequence  SDDGSNYDIIARVKDAVATPGETELKQMTAFYQELTALRKSSPLFTLGDGATVMKRVDFRNTGADQQTGLLVMTIDDGMQ
Template Known Secondary structure  GGGTTSS



TS
GGGG


S
STT

TT
STT
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   918.920.........930.........940.........950.........960.........970.........980.........990.......
 
   430. ........440.........450.........460.........470... ......480.........490...
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Query Sequence  FP. . . . . . . GCVVVMSNGDDGEKTIHLGENYGNKTWRDFLGNRQERVVTDE. . . NGEATFFCNGGSVSVWVIEE
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Template Sequence  AGASLDSRVDGIVVAINAAPESRTLQDFA. GTSLQLSAIQQAAGDRSLASGVQVAADGSVTLPAWSVAVLELPQ
Template Known Secondary structure  TSS
S
TT
SSS

TTS.SS


TGGGSTTTT

TTS

TT
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   998.1000.........1010.........1020...... ...1030.........1040.........1050.........1060.........1070
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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