Return to main results Retrieve Phyre Job Id

Job DescriptionP26612
Confidence100.00%DateThu Jan 5 11:42:59 GMT 2012
Rank2Aligned Residues478
% Identity43%Templatec1wpcA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:glucan 1,4-alpha-maltohexaosidase; PDBTitle: crystal structure of maltohexaose-producing amylase complexed with2 pseudo-maltononaose
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80..
Predicted Secondary structure 




















































Query SS confidence 















































































Query Sequence  NPTLLQCFHWYYPEGGKLWPELAERADGFNDIGINMVWLPPAYKGASGGYSVGYDSYDLFDLGEFDQKGSIPTKYGDKAQ
Query Conservation         
             
  




  


 



 

          

   

           
    

  
Alig confidence 
















































.





























Template Conservation         
 
           
  




  







 

       .  

   
 
          
    

  
Template Sequence  NGTMMQYFEWYLPNDGNHWNRLNSDASNLKSKGITAVWIPPAWKGASQN. DVGYGAYDLYDLGEFNQKGTVRTKYGTRSQ
Template Known Secondary structure 





TT

SSS
T




SSSTT.

S
STT
SS
S
BTTBSS
SS

Template Predicted Secondary structure 






















.


























Template SS confidence 















































































   6...10.........20.........30.........40.........50.... .....60.........70.........80....
 
   83......90.........100.........110.........120.........130.........140.........150.........160..
Predicted Secondary structure 





























































Query SS confidence 















































































Query Sequence  LLAAIDALKRNDIAVLLDVVVNHKMGADEKEAIRVQRVNADDRTQIDEEIIECEGWTRYTFPARAGQYSQFIWDFKCFSG
Query Conservation 
  

  

  

 



 
 

 
                                                       
Alig confidence 















































































Template Conservation 
  

  

  

 





 

                                                         
Template Sequence  LQAAVTSLKNNGIQVYGDVVMNHKGGADATEMVRAVEVNPNNRNQEVTGEYTIEAWTRFDFPGRGNTHSSFKWRWYHFDG
Template Known Secondary structure  TT


S
S
STT
S

B

TTTTTSS



B
GGG
Template Predicted Secondary structure 





























































Template SS confidence 















































































   85....90.........100.........110.........120.........130.........140.........150.........160....
 
   163......170.........180.........190.........200.........210.........220.........230.........240..
Predicted Secondary structure 






















































Query SS confidence 















































































Query Sequence  IDHIENPDEDGIFKIVNDYTGEGWNDQVDDELGNFDYLMGENIDFRNHAVTEEIKYWARWVMEQTQCDGFRLDAVKHIPA
Query Conservation                                           

   
  
   
      
    








   
  
Alig confidence 



.










































































Template Conservation      .                                  
 


  
  
          
    








   
  
Template Sequence  VDWD. QSRRLNNRIYKFRGHGKAWDWEVDTENGNYDYLMYADIDMDHPEVVNELRNWGVWYTNTLGLDGFRIDAVKHIKY
Template Known Secondary structure  S

.TTT

SS

STT



SS


TTS




SS
TT
T
STTGGGS
Template Predicted Secondary structure 



.


















































Template SS confidence 















































































   165... .170.........180.........190.........200.........210.........220.........230.........240...
 
   243......250.........260.........270.........280.........290.........300.........310.........320..
Predicted Secondary structure 





























Query SS confidence 















































































Query Sequence  WFYKEWIEHVQEVAPKPLFIVAEYWSHEVDKLQTYIDQVEGKTMLFDAPLQMKFHEASRMGRDYDMTQIFTGTLVEADPF
Query Conservation   
        
          

                       
                                 
Alig confidence 















































































Template Conservation           
           

                       

 
   
           
              
Template Sequence  SFTRDWINHVRSATGKNMFAVAEFWKNDLGAIENYLQKTNWNHSVFDVPLHYNLYNASKSGGNYDMRNIFNGTVVQRHPS
Template Known Secondary structure  T






S
TTT
S
TTTT
S
GGGTTTT

GG
Template Predicted Secondary structure 






















Template SS confidence 















































































   244.....250.........260.........270.........280.........290.........300.........310.........320...
 
   323......330.........340.........350.........360.........370.........380.........390.........400..
Predicted Secondary structure 





































Query SS confidence 















































































Query Sequence  HAVTLVANHDTQPLQALEAPVEPWFKPLAYALILLRENGVPSVFYPDLYGAHYEDVGGDGQTYPIDMPIIEQLDELILAR
Query Conservation    
 

 


  
              

 
  
 
  


 





 
                         
  

Alig confidence 
























































..........












Template Conservation    
 

 


  
              

 
 

 
  


 





 
       ..........        
  

Template Sequence  HAVTFVDNHDSQPEEALESFVEEWFKPLAYALTLTREQGYPSVFYGDYYGIPTHGVP. . . . . . . . . . AMRSKIDPILEAR
Template Known Secondary structure  G
S

TTTSTTSTT




TTTSSSSS
BGGGTB
..........

Template Predicted Secondary structure 



























..........
Template SS confidence 















































































   324.....330.........340.........350.........360.........370.........380 .........390...
 
   403......410.........420........ .430.........440.........450.........460.........470.........480
Predicted Secondary structure 









..























Query SS confidence 

























. .



















































Query Sequence  QRFAHGVQTLFFDHPNCIAFSRSGTD. . EFPGCVVVMSNGDDGEKTIHLGENYGNKTWRDFLGNRQERVVTDENGEATFF
Query Conservation       
          
  
 
    ..      

 

         
     
    
 
      
     
     
Alig confidence 

























..



















































Template Conservation 
    
          
 

 
            

  
         
     
    
        
     
     
Template Sequence  QKYAYGKQNDYLDHHNIIGWTREGNTAHPNSGLATIMSDGAGGSKWMFVGRNKAGQVWSDITGNRTGTVTINADGWGNFS
Template Known Secondary structure  T

S


SSS


TTSTT

SSS


GGGTT
TTSSS
S

TTS
Template Predicted Secondary structure 






































Template SS confidence 















































































   394.....400.........410.........420.........430.........440.........450.........460.........470...
 
   481........490..
Predicted Secondary structure 


Query SS confidence 











Query Sequence  CNGGSVSVWVIE
Query Conservation 
   
  
    
Alig confidence 











Template Conservation 
   
  
 
  
Template Sequence  VNGGSVSIWVNK
Template Known Secondary structure 
TT

Template Predicted Secondary structure 


Template SS confidence 











   474.....480.....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions