Job Description P76007 Confidence 99.26% Date Thu Jan 5 12:17:17 GMT 2012 Rank 2 Aligned Residues 73 % Identity 30% Template c3jxoB_ PDB info PDB header:transport protein Chain: B: PDB Molecule:trka-n domain protein; PDBTitle: crystal structure of an octomeric two-subunit trka k+ channel ring2 gating assembly, tm1088a:tm1088b, from thermotoga maritima Resolution 1.55 Å

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		411	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	N	P	W	E	Q	F	V	Y	Q	L	S	A	D	K	W	C	V	G	A	A	L	R	D	L	H	M	P	K	E	T	R	I	A	A	L	F	R	D	N	Q	L	L	H	P	T	G	S	T	R	L	R	E	G	D	V	L	C	V	I	G	R	E	R	D	L	P	A	L	G	K	L	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	Q	G	I	E	F	L	S	V	N	V	E	E	D	S	P	V	V	G	K	K	L	K	D	L	P	L	P	R	D	S	I	I	A	A	I	V	R	G	G	V	L	V	V	P	R	G	D	T	E	I	L	S	G	D	K	L	Y	V	I	V	S	A	E	A	K	E	T	V	E	E	T	L
Template Known Secondary structure			T	T										T	T		T	T	T	T		B	G	G	G					T	T									T	T							T	T		B			T	T									T	T	T
Template Predicted Secondary structure
Template SS confidence
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions