Job Description P76007 Confidence 14.13% Date Thu Jan 5 12:17:17 GMT 2012 Rank 63 Aligned Residues 53 % Identity 15% Template c2vspA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:pdz domain-containing protein 1; PDBTitle: crystal structure of the fourth pdz domain of pdz domain-2 containing protein 1 Resolution 2.60 Å

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		414	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470
Predicted Secondary structure
Query SS confidence
Query Sequence		W	E	Q	F	V	Y	Q	L	S	A	D	K	W	C	V	G	A	A	L	R	D	L	H	M	P	K	E	T	R	I	A	A	L	F	R	D	N	Q	L	L	H	P	T	G	S	T	R	L	R	E	G	D	V	L	C	V	I
Query Conservation
Alig confidence																																							.	.	.	.
Template Conservation																																							.	.	.	.
Template Sequence		M	K	P	K	L	C	R	L	A	K	G	E	N	G	Y	G	F	H	L	N	A	I	R	G	L	P	G	S	F	I	K	E	V	Q	K	G	G	.	.	.	.	P	A	D	L	A	G	L	E	D	E	D	V	I	I	E	V
Template Known Secondary structure												B	T	T	B	T	S				B			T	T		S			B		.				T	T	S	.	.	.	.					T	T			T	T
Template Predicted Secondary structure																																							.	.	.	.
Template SS confidence
		374	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410					.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions