Job Description P24197 Confidence 100.00% Date Thu Jan 5 11:41:08 GMT 2012 Rank 2 Aligned Residues 240 % Identity 13% Template d1b4ub_ SCOP info Phosphorylase/hydrolase-like LigB-like LigB-like Resolution 2.20

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		8	.	10	.	.	.	.	.	.	.	.	.	20											.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.					.	.	40	.	.	.	.	.	.	.	.	.	50	.	.						.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.																		.	.	.	.																.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.	.																		.	.	.	.																.	.	.	.	.
Query Sequence		A	L	F	L	G	H	G	S	P	M	N	V	L	.	.	.	.	.	.	.	.	.	.	E	D	N	L	Y	T	R	S	W	Q	K	L	G	M	T	L	P	.	.	.	.	R	P	Q	A	I	V	V	V	S	A	H	W	F	T	R	.	.	.	.	.	G	T	G	V	T	A	M	E	T	P	P	T	I	H	D	F
Query Conservation															.	.	.	.	.	.	.	.	.	.																		.	.	.	.																.	.	.	.	.
Alig confidence								.							.	.	.	.	.	.	.	.	.	.																		.	.	.	.																.	.	.	.	.
Template Conservation								.
Template Sequence		G	I	T	S	S	H	.	I	P	A	L	G	A	A	I	Q	T	G	T	S	D	N	D	Y	W	G	P	V	F	K	G	Y	Q	P	I	R	D	W	I	K	Q	P	G	N	M	P	D	V	V	I	L	V	Y	N	D	H	A	S	A	F	D	M	N	I	I	P	T	F	A	I	G	C	A	E	T	F	K	P	A	D
Template Known Secondary structure								.											T		T	T	S	T	T	T															T	S	T	T	T	S		S										S	S	S			T	T				S	B					S	S				B		B
Template Predicted Secondary structure								.
Template SS confidence
		7	.	.	10	.	.		.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.		.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.				.	.	.	130	.	.	.	.	.	.	.	.					.	140
Predicted Secondary structure																																						.																							.	.	.													.	.	.	.
Query SS confidence																																						.																							.	.	.													.	.	.	.
Query Sequence		G	G	F	P	Q	A	L	Y	D	T	H	Y	P	A	P	G	S	P	A	L	A	Q	R	L	V	E	L	L	A	P	I	P	V	T	L	D	.	K	E	A	W	G	F	D	H	G	S	W	G	V	L	I	K	M	Y	P	D	A	D	.	.	.	I	P	M	V	Q	L	S	I	D	S	S	K	.	.	.	.	P	A
Query Conservation																																						.																							.	.	.													.	.	.	.
Alig confidence						.	.	.																														.																							.	.	.													.	.	.	.
Template Conservation						.	.	.
Template Sequence		E	G	W	G	.	.	.	P	R	P	V	P	D	V	K	G	H	P	D	L	A	W	H	I	A	Q	S	L	I	L	D	E	F	D	M	T	I	M	N	Q	M	D	V	D	H	G	C	T	V	P	L	S	M	I	F	G	E	P	E	E	W	P	C	K	V	I	P	F	P	V	N	V	V	T	Y	P	P	P	S	G
Template Known Secondary structure			S	S	S	.	.	.	B		S	S																				T	T							S	S			B														S		S	S		S	S							B			S	S	S
Template Predicted Secondary structure						.	.	.
Template SS confidence
		86	.	.	.				90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		141	.	.	.	.	.	.	.	.	150	.	.	.						.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.
Query SS confidence															.	.	.	.	.
Query Sequence		A	W	H	F	E	M	G	R	K	L	A	A	L	.	.	.	.	.	R	D	E	G	I	M	L	V	A	S	G	N	V	V	H	N	L	R	T	V	K	W	H	G	D	S	S	P	Y	P	W	A	T	S	F	N	E	Y	V	K	A	N	L	T	W	Q	G	P	V	E	Q	H	P	L	V	N	Y	L	D	H	E	G
Query Conservation															.	.	.	.	.
Alig confidence															.	.	.	.	.																		.	.	.	.	.	.																						.		.	.	.
Template Conservation																																					.	.	.	.	.	.																						.		.	.	.
Template Sequence		K	R	C	F	A	L	G	D	S	I	R	A	A	V	E	S	F	P	E	D	L	N	V	H	V	W	G	T	G	G	M	S	H	Q	L	.	.	.	.	.	.	Q	G	P	R	A	G	L	I	N	K	E	F	D	L	N	F	I	D	K	L	I	.	S	.	.	.	D	P	E	E	L	S	K	M	P	H	I	Q	Y
Template Known Secondary structure																	T	S	S	S												S	S				.	.	.	.	.	.	S	S	T	T	T	T																.		.	.	.						T	T
Template Predicted Secondary structure																																					.	.	.	.	.	.																						.		.	.	.
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.							.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.		.				220	.	.	.	.	.	.	.	.	.	230	.	.
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	T	L	S	N	P	T	P	E	H	Y	L	P	L	L	Y	V	L	G	A	W	D	G	Q	E	P	I	T	I	P	V	E	G	I	E	M	G	S	L	S	M	L	S	V	Q	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	R	E	S	G	S	E	G	V	E	L	V	M	W	L	I	M	R	G	A	L	P	E	K	V	R	D	L	Y	T	F	Y	H	I	P	A	S	N	T	A	L	G	A	M	I	L
Template Known Secondary structure							T	T	G	G	G	G									T	S		S														T	T
Template Predicted Secondary structure
Template SS confidence
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions