Return to main results Retrieve Phyre Job Id

Job DescriptionP24197
Confidence45.35%DateThu Jan 5 11:41:08 GMT 2012
Rank16Aligned Residues85
% Identity15%Templatec3n0vD_
PDB info PDB header:hydrolaseChain: D: PDB Molecule:formyltetrahydrofolate deformylase; PDBTitle: crystal structure of a formyltetrahydrofolate deformylase (pp_0327)2 from pseudomonas putida kt2440 at 2.25 a resolution
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   76...80.........90.........100.........110.........120.........130.........140.........150.....
Predicted Secondary structure 

































Query SS confidence 















































































Query Sequence  YDTHYPAPGSPALAQRLVELLAPIPVTLDKEAWGFDHGSWGVLIKMYPDADIPMVQLSIDSSKPAAWHFEMGRKLAALRD
Query Conservation 
   
   
   

  
   
   
        




  


  
 
  




 


     
     

 

  

 
Alig confidence 






































..




.......












...










Template Conservation 




 



 



 

  

  
 

 
 

  
   ..  


.......


   
      ... 

 

  

 
Template Sequence  WILTADCPSXLGTVDVVTRYLFEQRCYVTEHHSFDDRQS. . GRFFI. . . . . . . RVEFRQPDDFDEA. . . GFRAGLAERSE
Template Known Secondary structure 

TTTT
TTT..T.......

SS

...G
Template Predicted Secondary structure 











..
.......





...
Template SS confidence 















































































   8.10.........20.........30.........40...... ...50. ........60.... .....70.....
 
   156 ...160.........170...
Predicted Secondary structure 
..............











Query SS confidence 
. . . . . . . . . . . . . .
















Query Sequence  E. . . . . . . . . . . . . . GIMLVASGNVVHNLRTV
Query Conservation 
.............. 






 




   
Alig confidence 
..............








.






Template Conservation   
  

 
       






  .
  
  
Template Sequence  AFGXAFELTAPNHRPKVVIXVSKA. DHCLNDL
Template Known Secondary structure  GGT

TT


SS
.
Template Predicted Secondary structure 











.


Template SS confidence 































   76...80.........90......... 100......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions