Job Description P24197 Confidence 17.07% Date Thu Jan 5 11:41:08 GMT 2012 Rank 48 Aligned Residues 134 % Identity 13% Template c3d3qB_ PDB info PDB header:transferase Chain: B: PDB Molecule:trna delta(2)-isopentenylpyrophosphate PDBTitle: crystal structure of trna delta(2)-isopentenylpyrophosphate2 transferase (se0981) from staphylococcus epidermidis.3 northeast structural genomics consortium target ser100 Resolution 2.70 Å

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		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.			.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.								.	.	150	.	.
Predicted Secondary structure																												.	.																																									.	.	.	.	.	.	.
Query SS confidence																												.	.																																									.	.	.	.	.	.	.
Query Sequence		A	P	G	S	P	A	L	A	Q	R	L	V	E	L	L	A	P	I	P	V	T	L	D	K	E	A	.	.	W	G	F	D	H	G	S	W	G	V	L	I	K	M	Y	P	D	A	D	I	P	M	V	Q	L	S	I	D	S	S	K	P	A	A	W	H	F	E	M	G	.	.	.	.	.	.	.	R	K	L	A	A
Query Conservation																												.	.																																									.	.	.	.	.	.	.
Alig confidence																												.	.											.	.	.	.	.																										.	.	.	.	.	.	.
Template Conservation																																								.	.	.	.	.
Template Sequence		A	S	G	K	T	E	L	S	I	E	V	A	K	K	F	N	G	E	I	I	S	G	D	S	X	Q	V	Y	Q	G	X	D	I	G	T	A	K	V	.	.	.	.	.	T	T	E	E	X	E	G	I	P	H	Y	X	I	D	I	L	P	P	D	A	S	F	S	A	Y	E	F	K	K	R	A	E	K	Y	I	K	D
Template Known Secondary structure		T	S	S												T	T								S	S	T	T	B	T	T			T	T	T	T			.	.	.	.	.		T	T	T	T	T	T					S	S	S		B		T	T	S
Template Predicted Secondary structure																																								.	.	.	.	.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.						.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	D	E	G	I	M	L	V	A	S	G	N	V	V	H	N	L	R	T	V	K	W	H	G	D	S	S	P	Y	P	W	A	T	S	F	N	E	Y	V	K	A	N	L	T	W	Q	G	P	V	E	Q	H	P	L	V	N	Y	L	D	H	E	G	G	T	L	S	N	P	T	P
Query Conservation
Alig confidence																																								.	.	.
Template Conservation																																								.	.	.
Template Sequence		I	T	R	R	G	K	V	P	I	I	A	G	G	T	G	L	Y	I	Q	S	L	L	Y	N	Y	A	F	E	D	K	X	K	Q	V	K	L	K	L	.	.	.	K	E	L	E	H	L	N	N	N	K	L	H	E	Y	L	A	S	F	D	K	E	S	A	K	D	I	H	P	N	N
Template Known Secondary structure					T	T																		B		S														.	.	.					S	S		S	S								T	T							T	S		T	T
Template Predicted Secondary structure																																								.	.	.
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.				130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions