Job Description P24197 Confidence 26.27% Date Thu Jan 5 11:41:08 GMT 2012 Rank 26 Aligned Residues 113 % Identity 15% Template c2gfqC_ PDB info PDB header:structural genomics, unknown function Chain: C: PDB Molecule:upf0204 protein ph0006; PDBTitle: structure of protein of unknown function ph0006 from pyrococcus2 horikoshii Resolution 1.75 Å

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		38	.	40	.	.	.	.	.	.	.	.	.				50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.		110	.	.	.
Predicted Secondary structure														.	.	.																																																													.
Query SS confidence														.	.	.																																																													.
Query Sequence		R	P	Q	A	I	V	V	V	S	A	H	W	.	.	.	F	T	R	G	T	G	V	T	A	M	E	T	P	P	T	I	H	D	F	G	G	F	P	Q	A	L	Y	D	T	H	Y	P	A	P	G	S	P	A	L	A	Q	R	L	V	E	L	L	A	P	I	P	V	T	L	D	K	E	A	W	G	.	F	D	H	G
Query Conservation														.	.	.																																																													.
Alig confidence														.	.	.															.												.	.	.	.	.	.																													.
Template Conservation																															.												.	.	.	.	.	.
Template Sequence		K	P	E	I	I	A	F	A	S	R	H	S	S	K	Q	K	L	P	A	L	T	T	H	V	T	G	N	W	G	.	K	A	X	Y	G	G	K	D	E	S	F	.	.	.	.	.	.	A	V	A	I	P	S	A	X	K	L	S	L	L	K	X	S	E	L	N	D	L	G	W	T	V	C	Y	E	A	T	H	H	G
Template Known Secondary structure				S											S	S													S	S	.			S	S	S	S		T	T			.	.	.	.	.	.			B																		S									S		S	S
Template Predicted Secondary structure																															.												.	.	.	.	.	.
Template SS confidence
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.		.	100	.	.	.	.	.	.	.	.	.							110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.					.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.							.	.	.	160	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.																			.	.	.	.	.	.
Query SS confidence																											.	.	.	.																			.	.	.	.	.	.
Query Sequence		S	W	G	V	L	I	K	M	Y	P	D	A	D	I	P	M	V	Q	L	S	I	D	S	S	K	.	.	.	.	P	A	A	W	H	F	E	M	G	R	K	L	A	A	L	R	D	E	.	.	.	.	.	.	G	I	M	L	V	A	S	G	N
Query Conservation																											.	.	.	.																			.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.																	.	.	.	.																			.	.	.	.	.	.
Template Conservation			.	.	.	.	.	.	.	.
Template Sequence		P	.	.	.	.	.	.	.	.	T	E	L	E	V	P	S	F	F	I	E	I	G	S	S	E	E	E	W	I	N	D	R	A	G	E	I	I	A	E	T	I	I	Y	V	L	D	N	Y	E	K	G	R	S	F	K	V	A	L	G	I	G	G
Template Known Secondary structure			.	.	.	.	.	.	.	.					S										S					T																			T	T	S	S											S
Template Predicted Secondary structure			.	.	.	.	.	.	.	.
Template SS confidence
		143									.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions