Job Description P13738 Confidence 100.00% Date Thu Jan 5 11:33:45 GMT 2012 Rank 1 Aligned Residues 376 % Identity 100% Template c1zcdA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:na(+)/h(+) antiporter 1; PDBTitle: crystal structure of the na+/h+ antiporter nhaa Resolution 3.45 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	S	D	A	S	G	G	I	I	L	I	I	A	A	I	L	A	M	I	M	A	N	S	G	A	T	S	G	W	Y	H	D	F	L	E	T	P	V	Q	L	R	V	G	S	L	E	I	N	K	N	M	L	L	W	I	N	D	A	L	M	A	V	F	F	L	L	V	G	L	E	V	K	R	E	L	M	Q	G	S	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	S	D	A	S	G	G	I	I	L	I	I	A	A	I	L	A	M	I	M	A	N	S	G	A	T	S	G	W	Y	H	D	F	L	E	T	P	V	Q	L	R	V	G	S	L	E	I	N	K	N	M	L	L	W	I	N	D	A	L	M	A	V	F	F	L	L	V	G	L	E	V	K	R	E	L	M	Q	G	S	L
Template Known Secondary structure				S	S																				S	S	S								T	T								T	T																																	S	T	T	T
Template Predicted Secondary structure
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	S	L	R	Q	A	A	F	P	V	I	A	A	I	G	G	M	I	V	P	A	L	L	Y	L	A	F	N	Y	A	D	P	I	T	R	E	G	W	A	I	P	A	A	T	D	I	A	F	A	L	G	V	L	A	L	L	G	S	R	V	P	L	A	L	K	I	F	L	M	A	L	A	I	I	D	D	L	G	A	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	S	L	R	Q	A	A	F	P	V	I	A	A	I	G	G	M	I	V	P	A	L	L	Y	L	A	F	N	Y	A	D	P	I	T	R	E	G	W	A	I	P	A	A	T	D	I	A	F	A	L	G	V	L	A	L	L	G	S	R	V	P	L	A	L	K	I	F	L	M	A	L	A	I	I	D	D	L	G	A	I
Template Known Secondary structure		S	S	T	T	T	S											T	T	T	T					G	G	G			S	S	T	T					T	S	S	S	S													S	S		S	S	S		S	S	S
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	I	I	A	L	F	Y	T	N	D	L	S	M	A	S	L	G	V	A	A	V	A	I	A	V	L	A	V	L	N	L	C	G	A	R	R	T	G	V	Y	I	L	V	G	V	V	L	W	T	A	V	L	K	S	G	V	H	A	T	L	A	G	V	I	V	G	F	F	I	P	L	K	E	K	H	G	R	S	P	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	I	I	A	L	F	Y	T	N	D	L	S	M	A	S	L	G	V	A	A	V	A	I	A	V	L	A	V	L	N	L	C	G	A	R	R	T	G	V	Y	I	L	V	G	V	V	L	W	T	A	V	L	K	S	G	V	H	A	T	L	A	G	V	I	V	G	F	F	I	P	L	K	E	K	H	G	R	S	P	A
Template Known Secondary structure								S																									T	T				T														T	T	T	S															S				G	G	G	S	S
Template Predicted Secondary structure
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	R	L	E	H	V	L	H	P	W	V	A	Y	L	I	L	P	L	F	A	F	A	N	A	G	V	S	L	Q	G	V	T	L	D	G	L	T	S	I	L	P	L	G	I	I	A	G	L	L	I	G	K	P	L	G	I	S	L	F	C	W	L	A	L	R	L	K	L	A	H	L	P	E	G	T	T	Y	Q	Q	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	R	L	E	H	V	L	H	P	W	V	A	Y	L	I	L	P	L	F	A	F	A	N	A	G	V	S	L	Q	G	V	T	L	D	G	L	T	S	I	L	P	L	G	I	I	A	G	L	L	I	G	K	P	L	G	I	S	L	F	C	W	L	A	L	R	L	K	L	A	H	L	P	E	G	T	T	Y	Q	Q	I
Template Known Secondary structure															T															S	S	S				T					S	S	T	T	T	T						T	T	G	G	G	S	T	T					T	S	S		T	T	T					S			G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
		329	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	V	V	G	I	L	C	G	I	G	F	T	M	S	I	F	I	A	S	L	A	F	G	S	V	D	P	E	L	I	N	W	A	K	L	G	I	L	V	G	S	I	S	S	A	V	I	G	Y	S	W	L	R	V	R	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	V	V	G	I	L	C	G	I	G	F	T	M	S	I	F	I	A	S	L	A	F	G	S	V	D	P	E	L	I	N	W	A	K	L	G	I	L	V	G	S	I	S	S	A	V	I	G	Y	S	W	L	R	V	R	L
Template Known Secondary structure		T	T					T	T														S	T	T	S	S		S	S														T	T	T	S	T	T	T	G	G	G	T	T	T
Template Predicted Secondary structure
Template SS confidence
		329	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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