Job Description P76576 Confidence 98.97% Date Thu Jan 5 12:24:45 GMT 2012 Rank 60 Aligned Residues 133 % Identity 9% Template c3mkrA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:coatomer subunit epsilon; PDBTitle: crystal structure of yeast alpha/epsilon-cop subcomplex of the copi2 vesicular coat Resolution 2.60 Å

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		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	D	S	I	P	A	A	E	K	F	A	A	E	N	K	N	T	Y	G	A	L	A	S	L	E	L	A	Q	Q	F	V	D	K	N	E	L	E	K	A	A	A	Q	L	Q	Q	G	L	A	D	T	S	D	E	N	L	K	A	V	I	N	L	R	L	A	R	V	Q	V	Q	L	K	Q	A	D	A	A	L	K	T	L
Query Conservation
Alig confidence																																																						.	.	.
Template Conservation																																																						.	.	.
Template Sequence		D	L	A	R	K	E	L	K	K	M	Q	D	Q	D	E	D	A	T	L	T	Q	L	A	T	A	W	V	S	L	A	A	G	G	E	K	L	Q	D	A	Y	Y	I	F	Q	E	M	A	D	K	C	S	P	.	.	.	T	L	L	L	L	N	G	Q	A	A	C	H	M	A	Q	G	R	W	E	A	A	E	G	V	L
Template Known Secondary structure																T	T																	T	T																S			.	.	.															T	T
Template Predicted Secondary structure																																																						.	.	.
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.				.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		149		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.		.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure			.																																	.
Query SS confidence			.																																	.
Query Sequence		D	.	T	I	K	G	E	G	W	A	A	I	V	A	D	L	R	G	E	A	L	L	S	K	G	D	K	Q	G	A	R	S	A	W	.	E	A	G	V	K	S	D	V	T	P	A	L	S	E	M	M	Q	M	K	I	N	N	L
Query Conservation			.																																	.
Alig confidence			.																																	.
Template Conservation
Template Sequence		Q	E	A	L	D	K	D	S	G	H	P	E	T	L	I	N	L	V	V	L	S	Q	H	L	G	K	P	P	E	V	T	N	R	Y	L	S	Q	L	K	D	A	H	R	S	H	P	F	I	K	E	Y	R	A	K	E	N	D	F
Template Known Secondary structure									T	T															T	T																		T	T
Template Predicted Secondary structure
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions