Job Description P76576 Confidence 66.55% Date Thu Jan 5 12:24:45 GMT 2012 Rank 122 Aligned Residues 78 % Identity 10% Template c3mkqB_ PDB info PDB header:transport protein Chain: B: PDB Molecule:coatomer subunit alpha; PDBTitle: crystal structure of yeast alpha/betaprime-cop subcomplex of the copi2 vesicular coat Resolution 2.50 Å

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		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	E	L	A	Q	Q	F	V	D	K	N	E	L	E	K	A	A	A	Q	L	Q	Q	G	L	A	D	T	S	D	E	N	L	K	A	V	I	N	L	R	L	A	R	V	Q	V	Q	L	K	Q	A	D	A	A	L	K	T	L	D	T	I	K	G	E	G	W	A	A	I	V	A	D	L	R	G	E	A	L	L	S
Query Conservation
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.
Template Conservation																										.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.
Template Sequence		W	E	R	L	I	Q	E	A	L	A	Q	G	N	A	S	L	A	E	M	I	Y	Q	T	Q	.	.	.	.	.	.	.	.	.	.	.	H	S	F	D	K	L	S	F	L	Y	L	V	T	G	D	V	N	K	L	S	K	M	Q	N	I	A	Q	T	R	E	D	F	G	S	M	L	L	.	.	.	.	N	T	F	Y
Template Known Secondary structure												T	T												T	.	.	.	.	.	.	.	.	.	.	.	T													T															T	T								.	.	.	.
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.
Template SS confidence
		678	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.												.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.					.	740	.	.
		171	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	G	D	K	Q	G	A	R	S	A	W	E	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	N	S	T	K	E	R	S	S	I	F	A	E
Template Known Secondary structure			T
Template Predicted Secondary structure
Template SS confidence
		743	.	.	.	.	.	.	750	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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