Job Description P76576 Confidence 38.85% Date Thu Jan 5 12:24:45 GMT 2012 Rank 132 Aligned Residues 86 % Identity 9% Template c3mkqA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:coatomer beta'-subunit; PDBTitle: crystal structure of yeast alpha/betaprime-cop subcomplex of the copi2 vesicular coat Resolution 2.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.						.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.
Query SS confidence																										.	.	.	.	.
Query Sequence		S	L	E	L	A	Q	Q	F	V	D	K	N	E	L	E	K	A	A	A	Q	L	Q	Q	G	.	.	.	.	.	L	A	D	T	S	D	E	N	L	K	A	V	I	N	L	R	L	A	R	V	Q	V	Q	L	K	Q	A	D	A	A	L	K	T	L	D	T	I	K	G	E	G	W	A	A	I	V	A	D	L	R	G
Query Conservation																										.	.	.	.	.
Alig confidence																										.	.	.	.	.																																								.	.	.	.	.	.	.
Template Conservation																																																																						.	.	.	.	.	.	.
Template Sequence		W	R	A	L	G	D	A	S	L	Q	R	F	N	F	K	L	A	I	E	A	F	T	N	A	H	D	L	E	S	L	F	L	L	H	S	S	F	N	N	K	E	G	L	V	T	L	A	K	D	A	E	T	T	G	K	F	N	L	A	F	N	A	Y	W	I	A	G	D	.	.	.	.	.	.	.	I	Q	G	A	K
Template Known Secondary structure												T	T													T												T	T															T	T													T		.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																						.	.	.	.	.	.	.
Template SS confidence
		684	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.								.	.	.	.	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	L	L	S	K	G	D	K	Q	G	A	R	S	A	W	E	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	L	L	I	K	S	Q	R	F	S	E	A	A	F	L	G	S	T
Template Known Secondary structure							T	T
Template Predicted Secondary structure
Template SS confidence
		757	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions