Job Description P76576 Confidence 97.36% Date Thu Jan 5 12:24:45 GMT 2012 Rank 103 Aligned Residues 136 % Identity 16% Template c3e4bD_ PDB info PDB header:protein binding Chain: D: PDB Molecule:algk; PDBTitle: crystal structure of algk from pseudomonas fluorescens wcs374r Resolution 2.50 Å

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		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100				.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure																																							.	.	.
Query SS confidence																																							.	.	.
Query Sequence		V	S	E	G	K	P	D	S	I	P	A	A	E	K	F	A	A	E	N	K	N	T	Y	G	A	L	A	S	L	E	L	A	Q	Q	F	V	D	.	.	.	K	N	E	L	E	K	A	A	A	Q	L	Q	Q	G	L	A	D	T	S	D	E	N	L	K	A	V	I	N	L	R	L	A	R	V	Q	V	Q	L	K	Q
Query Conservation																																							.	.	.
Alig confidence																								.	.	.	.												.	.	.																																			.
Template Conservation																								.	.	.	.																																																	.
Template Sequence		L	G	T	P	D	E	K	T	A	Q	A	L	L	E	K	I	A	P	G	Y	P	A	.	.	.	.	S	W	V	S	L	A	Q	L	L	Y	D	F	P	E	L	G	D	V	E	Q	M	M	K	Y	L	D	N	G	R	A	A	D	Q	P	R	A	E	L	L	L	G	K	L	Y	Y	E	G	K	.	W	V	P	A	D
Template Known Secondary structure		S	S	S														T	T	T	S	T		.	.	.	.													T	T	S																T	T																S	.	S	S
Template Predicted Secondary structure																								.	.	.	.																																																	.
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.					250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.		.	.	300	.	.
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170					.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure																																.	.	.	.
Query SS confidence																																.	.	.	.
Query Sequence		A	D	A	A	L	K	T	L	D	T	I	K	G	E	G	W	A	A	I	V	A	D	L	R	G	E	A	L	L	S	.	.	.	.	K	G	D	K	Q	G	A	R	S	A	W	E	A	G	V	K	S	D	V	T	P	A	L	S	E	M	M	Q	M	K	I	N	N	L	S	I
Query Conservation																																.	.	.	.
Alig confidence																.	.															.	.	.	.
Template Conservation																.	.
Template Sequence		A	K	A	A	E	A	H	F	E	K	A	V	G	R	.	.	E	V	A	A	D	Y	Y	L	G	Q	I	Y	R	R	G	Y	L	G	K	V	Y	P	Q	K	A	L	D	H	L	L	T	A	A	R	N	G	Q	N	S	A	D	F	A	I	A	Q	L	F	S	Q	G	K	G	T
Template Known Secondary structure											T	T	T	T	T	.	.															T	T	T	S	S																T	T		T	T									T	T	S		T	T	S
Template Predicted Secondary structure																.	.
Template SS confidence
		303	.	.	.	.	.	.	310	.	.	.	.	.	.			.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions