Job Description P76576 Confidence 99.04% Date Thu Jan 5 12:24:45 GMT 2012 Rank 52 Aligned Residues 151 % Identity 10% Template c3as5A_ PDB info PDB header:protein binding Chain: A: PDB Molecule:mama; PDBTitle: mama amb-1 p212121 Resolution 2.00 Å

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		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.															.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	Y	W	N	S	H	Q	V	D	S	A	R	S	A	S	L	A	Y	Q	N	A	V	T	A	V	S	E	G	K	P	D	S	I	P	A	A	E	K	F	A	A	E	N	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	T	Y	G	A	L	A	S	L	E	L	A	Q	Q	F	V	D	K	N	E	L	E
Query Conservation																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	G	I	S	H	A	K	A	G	R	Y	S	Q	A	V	M	L	L	E	Q	V	Y	D	A	D	A	F	D	V	D	V	A	L	H	L	G	I	A	Y	V	K	T	G	A	V	D	R	G	T	E	L	L	E	R	S	L	A	D	A	P	D	N	V	K	V	A	T	V	L	G	L	T	Y	V	Q	V	Q	K	Y	D
Template Known Secondary structure										T										T	T	T			T	T	S																T	T																	T	T																T
Template Predicted Secondary structure
Template SS confidence
		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure																																														.
Query SS confidence																																														.
Query Sequence		K	A	A	A	Q	L	Q	Q	G	L	A	D	T	S	D	E	N	L	K	A	V	I	N	L	R	L	A	R	V	Q	V	Q	L	K	Q	A	D	A	A	L	K	T	L	D	.	T	I	K	G	E	G	W	A	A	I	V	A	D	L	R	G	E	A	L	L	S	K	G	D	K	Q	G	A	R	S	A	W	E	A	G
Query Conservation																																														.
Alig confidence																	.	.	.																											.
Template Conservation																	.	.	.
Template Sequence		L	A	V	P	L	L	I	K	V	A	E	A	N	P	I	.	.	.	N	F	N	V	R	F	R	L	G	V	A	L	D	N	L	G	R	F	D	E	A	I	D	S	F	K	I	A	L	G	L	R	P	N	E	G	K	V	H	R	A	I	A	F	S	Y	E	Q	M	G	R	H	E	E	A	L	P	H	F	K	K	A
Template Known Secondary structure															T	T	.	.	.															T	T																	T	T															T	T
Template Predicted Secondary structure																	.	.	.
Template SS confidence
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.				.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
		185	.	.	.	.	190	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	K	S	D	V	T	P	A	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	E	L	D	E	G	A	S	V
Template Known Secondary structure										G
Template Predicted Secondary structure
Template SS confidence
		209	210	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions