Job Description P76576 Confidence 99.07% Date Thu Jan 5 12:24:45 GMT 2012 Rank 49 Aligned Residues 146 % Identity 16% Template c2pl2A_ PDB info PDB header:protein binding Chain: A: PDB Molecule:hypothetical conserved protein ttc0263; PDBTitle: crystal structure of ttc0263: a thermophilic tpr protein in thermus2 thermophilus hb27 Resolution 2.50 Å

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		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.		.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.																																																													.	.	.	.
Query SS confidence																	.																																																													.	.	.	.
Query Sequence		S	L	A	Y	Q	N	A	V	T	A	V	S	E	G	K	.	P	D	S	I	P	A	A	E	K	F	A	A	E	N	K	N	T	Y	G	A	L	A	S	L	E	L	A	Q	Q	F	V	D	K	N	E	L	E	K	A	A	A	Q	L	Q	Q	G	L	A	D	T	S	D	E	N	L	K	A	V	I	N	.	.	.	.
Query Conservation																	.																																																													.	.	.	.
Alig confidence																	.																		.	.																																										.	.	.	.
Template Conservation																																			.	.
Template Sequence		Q	N	P	L	R	L	G	V	Q	L	Y	A	L	G	R	Y	D	A	A	L	T	L	F	E	R	A	L	K	E	N	P	Q	D	.	.	P	E	A	L	Y	W	L	A	R	T	Q	L	K	L	G	L	V	N	P	A	L	E	N	G	K	T	L	V	A	R	T	P	R	Y	L	G	G	Y	M	V	L	S	E	A	Y
Template Known Secondary structure														T	T														T	T	S	S	S		.	.														T	T																	T	T
Template Predicted Secondary structure																																			.	.
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.			.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
																																								129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	R	L	A	R	V	Q	V	Q	L	K	Q	A	D	A	A	L	K	T	L	D	T	I	K	G	E	G	W	A	A	I	V	A	D	L	R	G	E	A	L	L	S
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	A	L	Y	R	Q	A	E	D	R	E	R	G	K	G	Y	L	E	Q	A	L	S	V	L	K	D	A	E	R	V	N	P	R	Y	A	P	L	H	L	Q	R	G	L	V	Y	A	L	L	G	E	R	D	K	A	E	A	S	L	K	Q	A	L	A	L	E	D	T	P	E	I	R	S	A	L	A	E	L	Y	L	S
Template Known Secondary structure							T		S	S																							T	T															T	T
Template Predicted Secondary structure
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	G	D	K	Q	G	A	R	S	A	W	E	A	G	V	K	S	D	V	T	P	A	L	S	E	M	M	Q	M	K	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	G	R	L	D	E	A	L	A	Q	Y	A	K	A	L	E	Q	A	P	K	D	L	D	L	R	V	R	Y	A	S	A
Template Known Secondary structure			T																S	T	T
Template Predicted Secondary structure
Template SS confidence
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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