Return to main results Retrieve Phyre Job Id

Job DescriptionP76576
Confidence99.01%DateThu Jan 5 12:24:45 GMT 2012
Rank55Aligned Residues143
% Identity10%Templatec1tnoI_
PDB info PDB header:transferaseChain: I: PDB Molecule:geranylgeranyltransferase type i alpha subunit; PDBTitle: rat protein geranylgeranyltransferase type-i complexed with2 a ggpp analog and a kkksktkcvim peptide derived from k-3 ras4b
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   54.....60.........70.........80.........90.........100... ......110.........120.........130..
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Query Sequence  SLAYQNAVTAVSEGKPDSIPAAEKFAAENKNTYGALASLELAQQFVDKNE. LEKAAAQLQQGLADTSDENLKAVINLRLA
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Template Sequence  VYDYFRAVLQRDERSERAFKLTRDAIELNAANY. . TVWHFRRVLLRSLQKDLQEEMNYIIAIIEEQPK. . . NYQVWHHRR
Template Known Secondary structure  TT



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   99100.........110.........120.........130. ........140.........150.........160.... .....170...
 
   133......140......... 150.........160.........170.........180.........190.........200.
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Query Sequence  RVQVQLKQADAALKTLD. TIKGEGWAAIVADLRGEALLSKGDKQGARSAWEAGVKSDVTPALSEMMQMKI
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Template Sequence  VLVEWLKDPSQELEFIADILNQDAKNYHAWQHRQWVIQEFRLWDNELQYVDQLLKEDVRNNSVWNQRHFV
Template Known Secondary structure  T

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   174.....180.........190.........200.........210.........220.........230.........240...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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