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Job Description | P64451 | Confidence | 2.77% | Date | Thu Jan 5 12:08:26 GMT 2012 |
Rank | 56 | Aligned Residues | 21 |
% Identity | 19% | Template | c3jwdA_ |
PDB info |
PDB header:viral protein | Chain: A: PDB Molecule:hiv-1 gp120 envelope glycoprotein; |
PDBTitle: structure of hiv-1 gp120 with gp41-interactive region: layered2 architecture and basis of conformational mobility
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Resolution | 2.61 Å |
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60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 |
Predicted Secondary structure |   |
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Query Sequence |   |
F | D | Q | S | K | Y | D | S | I | V | W | N | P | I | T | Y | Y | P | V | P | K |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
S | E | L | Y | K | Y | K | V | V | K | I | E | P | L | G | V | A | P | T | K | A |
Template Known Secondary structure |   |
T | T | T | T | S |  |  |  |  |  |  |  |  |  |  |  |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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481 | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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