Job Description P76213 Confidence 12.35% Date Thu Jan 5 12:20:36 GMT 2012 Rank 48 Aligned Residues 56 % Identity 14% Template c3eg9A_ PDB info PDB header:protein transport Chain: A: PDB Molecule:protein transport protein sec23a; PDBTitle: crystal structure of the mammalian copii-coat protein2 sec23/24 bound to the transport signal sequence of membrin Resolution 3.00 Å

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		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	Y	L	F	H	G	E	S	D	T	M	P	L	Y	I	G	K	S	V	N	I	R	S	R	V	L	S	H	L	R	T	P	D	E	A	A	M	L	R	Q	S	R	R	I	S	W	I	C	T	A	G	E	I	G	A	L	L	L	E	A	R	L	I	K	E	Q	Q	P	L
Query Conservation
Alig confidence							.																.																					.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.																.																					.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	I	L	L	M	.	D	T	F	F	Q	I	L	I	Y	H	G	E	T	I	A	.	Q	W	R	K	S	G	Y	Q	D	M	P	E	Y	E	N	F	R	H	L	L	.	.	.	.	.	.	.	.	.	.	.	.	Q	A	P	V	D	D	A	Q	E	I	L	H	S	R	F	P
Template Known Secondary structure							.			S	S												.						T	T	T	T	S	S	T	T								.	.	.	.	.	.	.	.	.	.	.	.														S	S	S
Template Predicted Secondary structure							.																.																					.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		646	.	.	.	650		.	.	.	.	.	.	.	.	.	660	.	.	.	.	.		.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.													.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions