Job Description P08337 Confidence 98.03% Date Thu Jan 5 11:01:08 GMT 2012 Rank 82 Aligned Residues 71 % Identity 15% Template c3kvhA_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:protein syndesmos; PDBTitle: crystal structure of human protein syndesmos (nudt16-like protein) Resolution 1.70 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.		.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure																																		.
Query SS confidence																																		.
Query Sequence		R	N	E	N	N	E	I	F	I	T	R	R	A	A	D	A	H	M	A	N	K	L	E	F	P	G	G	K	I	E	M	G	.	E	T	P	E	Q	A	V	V	R	E	L	Q	E	E	V	G	I	T	P	Q	H	F	S	L	F	E	K	L	E	Y	E	F	P	D	R	H	I	T	L	W	F	W	L	V	E	R	W
Query Conservation																																		.
Alig confidence														.	.	.	.	.																.																												.	.	.	.	.	.	.
Template Conservation														.	.	.	.	.																																												.	.	.	.	.	.	.
Template Sequence		I	P	M	R	F	S	V	L	M	Q	M	R	.	.	.	.	.	F	D	G	L	L	G	F	P	G	G	F	V	D	R	R	F	W	S	L	E	D	G	L	N	R	V	L	G	L	G	L	R	L	T	E	A	D	Y	L	S	S	H	L	.	.	.	.	.	.	.	T	R	V	V	A	H	L	Y	A	R	Q	L	T
Template Known Secondary structure														.	.	.	.	.	T	T	S					S						T	T	T										S			S						G	G	G							.	.	.	.	.	.	.
Template Predicted Secondary structure														.	.	.	.	.																																												.	.	.	.	.	.	.
Template SS confidence
		44	.	.	.	.	.	50	.	.	.	.	.						.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.								.	100	.	.	.	.	.	.	.	.	.	110	.
		91	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	G	E	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	E	Q	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		119	120	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions