Job Description P08337 Confidence 99.84% Date Thu Jan 5 11:01:08 GMT 2012 Rank 40 Aligned Residues 128 % Identity 14% Template c3gz6A_ PDB info PDB header:dna binding protein/dna Chain: A: PDB Molecule:mutt/nudix family protein; PDBTitle: crystal structure of shewanella oneidensis nrtr complexed2 with a 27mer dna Resolution 2.90 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.			.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.			.
Predicted Secondary structure																																													.	.																																	.	.
Query SS confidence																																													.	.																																	.	.
Query Sequence		M	K	K	L	Q	I	A	V	G	I	I	R	N	E	N	N	E	I	F	I	T	R	R	A	A	D	A	H	M	A	N	K	L	E	F	P	G	G	K	I	E	M	G	.	.	E	T	P	E	Q	A	V	V	R	E	L	Q	E	E	V	G	I	T	P	Q	H	F	S	L	F	E	K	L	E	Y	E	F	.	.	P
Query Conservation																																													.	.																																	.	.
Alig confidence																												.																	.	.																																	.	.
Template Conservation																												.
Template Sequence		L	L	T	V	D	A	V	L	F	T	Y	H	D	Q	Q	L	K	V	L	L	V	Q	R	S	N	H	.	P	F	L	G	L	W	G	L	P	G	G	F	I	D	E	T	C	D	E	S	L	E	Q	T	V	L	R	K	L	A	E	K	T	A	V	V	P	P	Y	I	E	Q	L	C	T	V	G	N	N	S	R	D	A
Template Known Secondary structure														S	S	S										S	S	.	S	S	T	T					S						T	T	T			S														S	S			S											S	S	S		T
Template Predicted Secondary structure																												.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.		.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.			.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.		.	.	.	.	.	.
Predicted Secondary structure																			.	.																															.
Query SS confidence																			.	.																															.
Query Sequence		D	R	H	I	T	L	W	F	W	L	V	E	R	W	E	G	E	.	.	P	W	G	K	E	G	Q	P	G	E	W	M	S	L	V	G	L	N	A	D	D	F	P	P	A	N	E	P	V	I	.	A	K	L	K	R	L
Query Conservation																			.	.																															.
Alig confidence																			.	.																															.
Template Conservation
Template Sequence		R	G	W	S	V	T	V	C	Y	T	A	L	M	S	Y	Q	A	C	Q	I	Q	I	A	S	V	S	D	V	K	W	W	P	L	A	D	V	L	Q	M	P	L	A	F	D	H	L	Q	L	I	E	Q	A	R	E	R	L
Template Known Secondary structure		T	S													S									S		S	S										T	T	S		B	S	T	T
Template Predicted Secondary structure
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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