Return to main results Retrieve Phyre Job Id

Job DescriptionP08337
Confidence99.91%DateThu Jan 5 11:01:08 GMT 2012
Rank12Aligned Residues125
% Identity18%Templatec3cngC_
PDB info PDB header:hydrolaseChain: C: PDB Molecule:nudix hydrolase; PDBTitle: crystal structure of nudix hydrolase from nitrosomonas europaea
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
Predicted Secondary structure 

































Query SS confidence 















































































Query Sequence  MKKLQIAVGIIRNENNEIFITRRAADAHMANKLEFPGGKIEMGETPEQAVVRELQEEVGITPQHFSLFEKLEYEFPDRHI
Query Conservation 
  
 
   

      


 

       
 
  


 

  
    

 

  




                    
Alig confidence 



























.











































..




Template Conservation    

 
 
 


     


  
     . 
 
 



 

 


  


 


 




             ..     
Template Sequence  YQNPKVIVGCIPEWENKVLLCKRAIAPY. RGKWTLPAGFXENNETLVQGAARETLEEANARVEIRELYAVYSL. . PHISQ
Template Known Secondary structure 



TTSSSSS.TT

S

TT




..GGGT
Template Predicted Secondary structure 












.















..



Template SS confidence 















































































   34.....40.........50.........60. ........70.........80.........90.........100..... ....110
 
   81........90...... ...100.........110...... ...120........
Predicted Secondary structure 



.









.



Query SS confidence 















.



















.











Query Sequence  TLWFWLVERWEGEPWG. KEGQPGEWMSLVGLNADDFP. PANEPVIAKLKR
Query Conservation                  . 
     
    

      .         
  
Alig confidence 















.



















.











Template Conservation      
             
     
    

    
  
     
     
Template Sequence  VYXLFRAKLLDLDFFPGIESLEVRLFGEQEIPWNDIAFRVIHDPLKRYXE
Template Known Secondary structure 

S




TT
GGG

GGGBS
Template Predicted Secondary structure 



















Template SS confidence 

















































   111........120.........130.........140.........150.........160
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions