Return to main results Retrieve Phyre Job Id

Job DescriptionP08337
Confidence99.82%DateThu Jan 5 11:01:08 GMT 2012
Rank49Aligned Residues124
% Identity19%Templatec2qkmF_
PDB info PDB header:hydrolaseChain: F: PDB Molecule:spac19a8.12 protein; PDBTitle: the crystal structure of fission yeast mrna decapping enzyme dcp1-dcp22 complex
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10..... ....20.........30.........40.........50.........60.........70.........80
Predicted Secondary structure 



.




























Query SS confidence 













.
































































Query Sequence  KKLQIAVGIIRNEN. NEIFITRRAADAHMANKLEFPGGKIEMGETPEQAVVRELQEEVGITPQHFSLFEKLEYEFPDRHI
Query Conservation    
 
   

    .  


 

       
 
  


 

  
    

 

  




                    
Alig confidence 













.











...

















































Template Conservation    


 



 
    





     ...  
 






 


   

 


 






         
        
Template Sequence  TRIPVRGAIMLDMSMQQCVLVKGWKAS. . . SGWGFPKGKIDKDESDVDCAIREVYEETGFDCSSRINPNEFIDMTIRGQN
Template Known Secondary structure 

B
TTS

SSTT...

BB
S

TT

S


TTT

TT
TT
Template Predicted Secondary structure 












...

























Template SS confidence 















































































   94.....100.........110.........120 .........130.........140.........150.........160.........170
 
   81........90.... .....100.........110......... 120........
Predicted Secondary structure 

....














.....
Query SS confidence 













. . . .
























. . . . .








Query Sequence  TLWFWLVERWEGEP. . . . WGKEGQPGEWMSLVGLNADDFPPAN. . . . . EPVIAKLKR
Query Conservation                ....   
     
    

         .....      
  
Alig confidence 













....
























.....








Template Conservation    


   
 

    
    

  
 

 
 


         
  
 



 

 
Template Sequence  VRLYIIPGISLDTRFESRTRKEISKIEWHNLMDLPTFKKNMKNKFYMVIPFLAPLKK
Template Known Secondary structure 



TT




SS
TT

GGGSTTSS





BSS
Template Predicted Secondary structure 




















Template SS confidence 
























































   171........180.........190.........200.........210.........220.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions