Job Description P08337 Confidence 99.60% Date Thu Jan 5 11:01:08 GMT 2012 Rank 75 Aligned Residues 108 % Identity 18% Template c2pnyA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:isopentenyl-diphosphate delta-isomerase 2; PDBTitle: structure of human isopentenyl-diphosphate delta-isomerase 2 Resolution 1.81 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.		.	30	.	.	.	.	.		.	.	.	.	40	.	.	.	.	.										.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.						.	.	.	.
Predicted Secondary structure																										.								.											.	.	.	.	.	.	.	.	.																				.	.	.	.	.
Query SS confidence																										.								.											.	.	.	.	.	.	.	.	.																				.	.	.	.	.
Query Sequence		Q	I	A	V	G	I	I	R	N	E	N	N	E	I	F	I	T	R	R	A	A	D	A	H	.	M	A	N	K	L	E	F	.	P	G	G	K	I	E	M	G	E	T	.	.	.	.	.	.	.	.	.	P	E	Q	A	V	V	R	E	L	Q	E	E	V	G	I	T	P	Q	H	.	.	.	.	.	F	S	L	F
Query Conservation																										.								.											.	.	.	.	.	.	.	.	.																				.	.	.	.	.
Alig confidence																										.								.											.	.	.	.	.	.	.	.	.																				.	.	.	.	.
Template Conservation
Template Sequence		R	A	F	S	V	V	L	F	N	T	K	N	R	I	L	I	Q	Q	R	S	D	T	K	V	T	F	P	G	Y	F	T	D	S	C	S	S	H	P	L	Y	N	P	A	E	L	E	E	K	D	A	I	G	V	R	R	A	A	Q	R	R	L	Q	A	E	L	G	I	P	G	E	Q	I	S	P	E	D	I	V	F	M
Template Known Secondary structure											T	T										T	T		S	S	S	T	T		B			S						B	S	S							G	G	G																			T	T	T			G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
		69	70	.	.	.	.	.	.	.	.	.	80						.	.	.	.	.	.	.	.	.	90	.	.		.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure														.	.	.	.	.													.
Query SS confidence														.	.	.	.	.													.
Query Sequence		E	K	L	E	Y	E	F	P	D	R	H	I	.	.	.	.	.	T	L	W	F	W	L	V	E	R	W	E	G	.	E	P	W	G	K	E	G	Q	P	G	E	W	M	S	L	V	G	L	N	A
Query Conservation														.	.	.	.	.													.
Alig confidence														.	.	.	.	.													.
Template Conservation
Template Sequence		T	I	Y	H	H	K	A	K	S	D	R	I	W	G	E	H	E	I	C	Y	L	L	L	V	R	K	N	V	T	L	N	P	D	P	S	E	T	K	S	I	L	Y	L	S	Q	E	E	L	W	E
Template Known Secondary structure										S	S	S	S	B																					T	T	T
Template Predicted Secondary structure
Template SS confidence
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions