Job Description P08337 Confidence 99.41% Date Thu Jan 5 11:01:08 GMT 2012 Rank 79 Aligned Residues 103 % Identity 17% Template c2j8qB_ PDB info PDB header:nuclear protein Chain: B: PDB Molecule:cleavage and polyadenylation specificity factor 5; PDBTitle: crystal structure of human cleavage and polyadenylation2 specificity factor 5 (cpsf5) in complex with a sulphate3 ion. Resolution 2.3 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.			.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.			.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.																																													.	.
Query SS confidence																	.	.																																													.	.
Query Sequence		K	L	Q	I	A	V	G	I	I	R	N	E	N	N	E	.	.	I	F	I	T	R	R	A	A	D	A	H	M	A	N	K	L	E	F	P	G	G	K	I	E	M	G	E	T	P	E	Q	A	V	V	R	E	L	Q	E	E	V	G	I	T	.	.	P	Q	H	F	S	L	F	E	K	L	E	Y	E	F	P	D	R
Query Conservation																	.	.																																													.	.
Alig confidence																	.	.											.	.	.	.	.																														.	.
Template Conservation																													.	.	.	.	.
Template Sequence		R	R	T	V	E	G	V	L	I	V	H	E	H	R	L	P	H	V	L	L	L	Q	L	G	T	T	F	.	.	.	.	.	F	K	L	P	G	G	E	L	N	P	G	E	D	E	V	E	G	L	K	R	L	M	T	E	I	L	G	R	Q	D	D	W	V	I	D	D	C	I	G	N	W	W	R	P	N	F	E	P
Template Known Secondary structure													S	S	S										S	T	T		.	.	.	.	.				S						T	T																																		S	S	S	S
Template Predicted Secondary structure																													.	.	.	.	.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.						.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		79	80														.	.	.	.	.	.	.	.	.	90	.	.	.		.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.														.
Query SS confidence				.	.	.	.	.	.	.	.	.	.	.	.	.														.
Query Sequence		H	I	.	.	.	.	.	.	.	.	.	.	.	.	.	T	L	W	F	W	L	V	E	R	W	E	G	E	.	P	W	G	K	E	G	Q	P	G	E	W	M	S	L	V	G	L
Query Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.														.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.														.
Template Conservation
Template Sequence		P	Q	Y	P	Y	I	P	A	H	I	T	K	P	K	E	H	K	K	L	F	L	V	Q	L	Q	E	K	A	L	F	A	V	P	K	N	Y	K	L	V	A	A	P	L	F	E	L
Template Known Secondary structure				B	S	S			T	T		S			S												S	S							T	T
Template Predicted Secondary structure
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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