Job Description P08337 Confidence 99.67% Date Thu Jan 5 11:01:08 GMT 2012 Rank 72 Aligned Residues 123 % Identity 19% Template c2i6kA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:isopentenyl-diphosphate delta-isomerase 1; PDBTitle: crystal structure of human type i ipp isomerase complexed2 with a substrate analog Resolution 2.00 Å

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		4	.	.	.	.	.	10		.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.		.	30	.	.	.	.	.		.	.	.	.	40	.	.	.	.	.										.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.						.	.
Predicted Secondary structure									.																			.								.											.	.	.	.	.	.	.	.	.																				.	.	.	.	.
Query SS confidence									.																			.								.											.	.	.	.	.	.	.	.	.																				.	.	.	.	.
Query Sequence		L	Q	I	A	V	G	I	.	I	R	N	E	N	N	E	I	F	I	T	R	R	A	A	D	A	H	.	M	A	N	K	L	E	F	.	P	G	G	K	I	E	M	G	E	T	.	.	.	.	.	.	.	.	.	P	E	Q	A	V	V	R	E	L	Q	E	E	V	G	I	T	P	Q	H	.	.	.	.	.	F	S
Query Conservation									.																			.								.											.	.	.	.	.	.	.	.	.																				.	.	.	.	.
Alig confidence									.																			.								.											.	.	.	.	.	.	.	.	.																				.	.	.	.	.
Template Conservation
Template Sequence		L	H	R	A	F	S	V	F	L	F	N	T	E	N	K	L	L	L	Q	Q	R	S	D	A	K	I	T	F	P	G	C	F	T	N	T	C	C	S	H	P	L	S	N	P	A	E	L	E	E	S	D	A	L	G	V	R	R	A	A	Q	R	R	L	K	A	E	L	G	I	P	L	E	E	V	P	P	E	E	I	N
Template Known Secondary structure													T	T										T	T		S	S	S	T	T				S	S						B	S	S	T	T	T	S			G	G	G																			G	G	G	S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
		67	.	.	70	.	.	.	.	.	.	.	.	.						80	.	.	.	.	.	.	.	.	.	90	.	.		.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110										.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.														.																			.	.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.														.																			.	.	.	.	.	.	.	.	.
Query Sequence		L	F	E	K	L	E	Y	E	F	P	D	R	H	.	.	.	.	.	I	T	L	W	F	W	L	V	E	R	W	E	G	.	E	P	W	G	K	E	G	Q	P	G	E	W	M	S	L	V	G	L	.	.	.	.	.	.	.	.	.	N	A	D	D	F	P	P	A	N	E	P	V	I	A	K	L
Query Conservation															.	.	.	.	.														.																			.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.														.																			.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	L	T	R	I	H	Y	K	A	Q	S	D	G	I	W	G	E	H	E	I	D	Y	I	L	L	V	R	X	N	V	T	L	N	P	D	P	N	E	I	K	S	Y	C	Y	V	S	K	E	E	L	K	E	L	L	K	K	A	A	S	G	E	I	K	I	T	P	W	F	K	I	I	A	A	T	F
Template Known Secondary structure												S	S	S	S	B																					T	T	T																					T	T	S	S		B											T
Template Predicted Secondary structure
Template SS confidence
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions