 |
Job Description | P42905 | Confidence | 40.20% | Date | Thu Jan 5 12:02:03 GMT 2012 |
Rank | 1 | Aligned Residues | 51 |
% Identity | 16% | Template | c1ciiA_ |
PDB info |
PDB header:transmembrane protein | Chain: A: PDB Molecule:colicin ia; |
PDBTitle: colicin ia
|
Resolution | 3.00 Å |
|
 |
  |   |
69 | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | |
110 | . | . | . | . | . | . | . | . | . | 120 |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | Q | P | P | N | V | I | I | G | T | I | V | G | T | A | F | A | I | T | T | G | V | K | P | D | V | A | V | G | V | A | V | P | F | A | V | A | V | Q | M | G | . |
I | T | F | L | F | S | V | M | S | G | V |
Query Conservation |   |
|   |
|
|
|   |   |   |
|   |
|
|   |
|
|   |
|
|   |
|
|   |   |   |
|   |
|
|
|
|
|
|
|
|
|   |
|
|   |   |
| . |   |   |   |   |   |   |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
T | I | I | A | G | N | A | A | T | A | L | V | A | L | V | F | S | I | L | T | G | S | A | L | G | . |
I | I | G | Y | G | L | L | M | A | V | T | G | A | L | I | D | E | S | L | V | E | K | A | N | K | F | W |
Template Known Secondary structure |   |
T | T | B | T | T |
| B |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|
|  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  | T |
|
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
573 | . | . | . | . | . | . | 580 | . | . | . | . | . | . | . | . | . | 590 | . | . | . | . | . | . | . | |
. | . | 600 | . | . | . | . | . | . | . | . | . | 610 | . | . | . | . | . | . | . | . | . | 620 | . | . | . | . |
  |
Send structure to FirstGlance for more viewing options
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|