Job Description P30235 Confidence 100.00% Date Thu Jan 5 11:46:18 GMT 2012 Rank 31 Aligned Residues 285 % Identity 18% Template d2absa1 SCOP info Ribokinase-like Ribokinase-like Ribokinase-like Resolution 1.10

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.																					.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.				.	.	.	.	.	.	60
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.
Query Sequence		K	D	Y	V	V	I	I	G	S	A	N	I	D	V	A	G	Y	S	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	S	L	N	Y	A	D	S	N	P	G	K	I	K	F	T	P	G	G	V	G	R	N	I	A	Q	N	L	A	L	L	.	.	.	G	N	K	A	W	L	L
Query Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.
Template Conservation
Template Sequence		P	M	R	V	F	A	I	G	N	P	I	L	D	L	V	A	E	V	P	S	S	F	L	D	E	F	F	L	K	R	G	D	A	T	L	A	T	P	E	Q	M	R	I	Y	S	T	L	D	Q	F	N	P	T	S	L	P	G	G	S	A	L	N	S	V	R	V	V	Q	K	L	L	R	K	P	G	S	A	G	Y	M
Template Known Secondary structure																											T	T			T	T							G	G	G	G	G	G	G	G	T	G	G	G	G								S															S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure
Query SS confidence
Query Sequence		S	A	V	G	S	D	F	Y	G	Q	S	L	L	T	Q	T	N	Q	S	G	V	Y	V	D	K	C	L	I	V	P	G	E	N	T	S	S	Y	L	S	L	L	D	N	T	G	E	M	L	V	A	I	N	D	M	N	I	S	N	A	I	T	A	E	Y	L	A	Q	H	G	E	F	I	Q	R	A	K	V	I	V	A
Query Conservation
Alig confidence																													.															.											.														.	.
Template Conservation																													.															.											.														.	.
Template Sequence		G	A	I	G	D	D	P	R	G	Q	V	L	K	E	L	C	D	K	E	G	L	A	T	R	F	M	V	.	A	P	G	Q	S	T	G	V	C	A	V	L	I	N	.	E	K	E	R	T	L	C	T	H	L	.	G	A	C	G	S	F	R	L	P	E	D	W	T	.	.	T	F	A	S	G	A	L	I	F	Y	A
Template Known Secondary structure						S	S														T								.		T	T												.	T	T									.	G	G	G	G	G					T	T			.	.			T	T	T
Template Predicted Secondary structure																													.															.											.														.	.
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.		.	120	.	.	.	.	.	.	.	.	.	130	.	.		.	.	.	.	.	.	.	140	.	.		.	.	.	.	.	.	.	150	.	.	.	.	.			.	.	.	.	160	.	.	.	.	.	.
		141	.	.	.							.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.					.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure						.	.	.	.	.	.																														.	.	.	.																													.	.	.	.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.																														.	.	.	.																													.	.	.	.	.	.	.	.	.
Query Sequence		D	C	N	I	.	.	.	.	.	.	S	E	E	A	L	A	W	I	L	D	N	A	A	N	V	P	V	F	V	D	P	V	S	A	W	K	C	V	K	.	.	.	.	V	R	D	R	L	N	Q	I	H	T	L	K	P	N	R	L	E	A	E	T	L	S	G	I	A	L	S	G	.	.	.	.	.	.	.	.	.
Query Conservation						.	.	.	.	.	.																														.	.	.	.																													.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.																														.	.	.	.																													.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	A	Y	T	L	T	A	T	P	K	N	A	L	E	V	A	G	Y	A	H	G	I	P	N	A	I	F	T	L	N	L	S	A	P	F	C	V	E	L	Y	K	D	A	M	Q	S	L	L	L	H	T	N	I	L	F	G	N	E	E	E	F	A	H	L	A	K	V	H	N	L	V	N	K	E	H	A	V	E	V	C
Template Known Secondary structure			G	G	G	G	T	T														T	S	T	T																										T		S																	T
Template Predicted Secondary structure
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.								.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
Predicted Secondary structure																																					.	.	.	.	.	.	.
Query SS confidence																																					.	.	.	.	.	.	.
Query Sequence		R	E	D	V	A	K	V	A	A	W	F	H	Q	H	G	L	N	R	L	V	L	S	M	G	G	D	G	V	Y	Y	S	D	I	S	G	.	.	.	.	.	.	.	E	S	G	W	S	A	P	I	K	T	N	V	I	N	V	T	G	A	G	D	A	M	M	A	G	L	A	S	C	W	V	D	G	M	P	F	A	E
Query Conservation																																					.	.	.	.	.	.	.
Alig confidence																																					.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	G	A	L	R	L	L	T	A	G	Q	N	T	S	A	T	K	L	V	V	M	T	R	G	H	N	P	V	I	A	A	E	Q	T	A	D	G	T	V	V	V	H	E	V	G	V	P	V	V	A	A	E	K	I	V	D	T	N	G	A	G	D	A	F	V	G	G	F	L	Y	A	L	S	Q	G	K	T	V	K	Q
Template Known Secondary structure										T	T				S	S									T	T	S									T	T	S														G	G	G					T	T															T	T
Template Predicted Secondary structure
Template SS confidence
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.
		275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	V	R	F	A	Q	G	C	S	S	M	A	L	S	C	E	Y	T	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		C	I	M	C	G	N	A	C	A	Q	D	V	I	Q	H	V	G	F	S
Template Known Secondary structure															T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		337	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions