Job Description P30235 Confidence 99.50% Date Thu Jan 5 11:46:18 GMT 2012 Rank 51 Aligned Residues 141 % Identity 16% Template c3rm5B_ PDB info PDB header:transferase Chain: B: PDB Molecule:hydroxymethylpyrimidine/phosphomethylpyrimidine kinase PDBTitle: structure of trifunctional thi20 from yeast Resolution 2.68 Å

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		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.				.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.			.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.		.	.	.	.	220	.
Predicted Secondary structure																				.	.	.																																.	.																				.
Query SS confidence																				.	.	.																																.	.																				.
Query Sequence		A	L	A	W	I	L	D	N	A	A	N	V	P	V	F	V	D	P	.	.	.	V	S	A	W	K	C	V	K	V	R	D	R	L	N	Q	I	H	T	L	K	P	N	R	L	E	A	E	T	L	S	G	.	.	I	A	L	S	G	R	E	D	V	A	K	V	A	A	W	F	H	Q	H	.	G	L	N	R	L	V
Query Conservation																				.	.	.																																.	.																				.
Alig confidence																				.	.	.																																.	.																				.
Template Conservation
Template Sequence		H	E	K	L	L	Q	L	G	E	N	R	P	K	L	V	V	D	P	V	L	V	A	K	D	I	V	S	L	I	T	E	K	V	A	P	F	A	D	I	L	T	P	N	I	P	E	C	Y	K	L	L	G	E	E	R	K	V	N	G	L	Q	D	I	F	Q	I	A	K	D	L	A	K	I	T	K	C	S	N	I	L
Template Known Secondary structure									G	G	G																							T	G	G	G		S					B								T	T	S					S	S																		S
Template Predicted Secondary structure
Template SS confidence
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
		222	.	.	.	.	.	.	.	230	.	.	.		.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
Predicted Secondary structure														.
Query SS confidence														.
Query Sequence		L	S	M	G	G	D	G	V	Y	Y	S	D	.	I	S	G	E	S	G	W	S	A	P	I	K	T	N	V	I	N	V	T	G	A	G	D	A	M	M	A	G	L	A	S	C	W	V	D	G	M	P	F	A	E	S	V	R	F	A	Q	G	C	S	S	M	A	L	S
Query Conservation														.
Alig confidence														.
Template Conservation
Template Sequence		V	K	G	G	H	I	T	D	V	L	F	L	G	A	E	Q	K	F	I	I	F	K	G	N	F	V	N	T	T	H	T	H	G	T	G	C	T	L	A	S	A	I	A	S	N	L	A	R	G	Y	S	L	P	Q	S	V	Y	G	G	I	E	Y	V	Q	N	A	V	A
Template Known Secondary structure														T	T	T	T													S			B	T																T
Template Predicted Secondary structure
Template SS confidence
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions